Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

Subject, 341 a.a., class I SAM-dependent methyltransferase from Magnetospirillum magneticum AMB-1

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 22/278 (7%)

Query: 65  EAAFDSAVLFLPKSR-ELAAYLLNALASRLAGRELYLVGEKRGGIEGAAKQLQ-AFGKPR 122
           E  F + ++ L K + E  A L  A      G  L   G    G     ++ +  FG   
Sbjct: 69  EGRFAAGLVLLTKHKAENRANLARAWGLLEPGGVLVCCGANALGAASHEREAERVFGLAG 128

Query: 123 KLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQ---VVSLPGVFSHGRLDRG 179
            L   +    W V    +P A   E LA     A E  P++   +V+  G FS   +D+G
Sbjct: 129 SLSKHQARTFWMVRGTDSPPADCAEWLA-----AAEPRPVEGCGLVARAGCFSSDHVDKG 183

Query: 180 TALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTLAANG 239
           + LLL  L     G   D G G G L A + RR+P+    + D+D F   A  L  A + 
Sbjct: 184 SRLLLDCLPEGLAGRGADLGAGWGYLSAEILRRFPE----VTDIDLFEAEALALEDARSN 239

Query: 240 LEGEVIS-------GDGIDAAPTELSLILSNPPFHTGVHTNYQASENLLKKSAVHLRKGG 292
           L G   +       G G+         I+SNPPFH G   +    +  +  +   +R+ G
Sbjct: 240 LGGSEKAAFHWLDVGAGLPKCEP-YDWIVSNPPFHEGRKADPAIGQGFITAAWKAIRRRG 298

Query: 293 EMRLVANSFLRYQPLIEGALGNCQVRDEADGFRIYQAT 330
           +  LVAN  L Y+  +        +  EADGF++Y A+
Sbjct: 299 KFILVANRSLPYEAELRRRFREVTLLREADGFKVYLAS 336