Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

Subject, 342 a.a., 16S RNA G1207 methylase RsmC from Enterobacter asburiae PDN3

 Score =  197 bits (502), Expect = 2e-55
 Identities = 121/333 (36%), Positives = 192/333 (57%), Gaps = 12/333 (3%)

Query: 3   PRSEVLLRQAELFQ-GPLLIAGAPADDLLGQL--PQAQAWTWHAGDQAMLESRFAGRSHY 59
           P SEVLLR ++ F+   +L AG   DDL  +    +++A T +     +L  +   R+ +
Sbjct: 6   PASEVLLRHSDDFEESRILFAGDMQDDLPARFNCAESRAHTQYYHHWQVLSRQMGERARF 65

Query: 60  GVEAPE---AAFDSAVLFLPKSRELAAY-LLNALASRLAGRELYLVGEKRGGIEGAAKQL 115
            + A +   A  D+ + + PK++  A + L+N L+    G ++++VGE R G+  A + L
Sbjct: 66  SLVAEQSDIADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGCDIFVVGENRSGVRSAEQML 125

Query: 116 QAFGKPRKLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQVVSLPGVFSHGR 175
           + +    K+DSAR C L+   +++     P ++  + ++L   DG L + +LPGVFS   
Sbjct: 126 EGYAPLNKVDSARRCGLYHGRLEKQTTFDP-QAYWDEYQL---DG-LTIKTLPGVFSRDA 180

Query: 176 LDRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTL 235
           LD G+ LLL  L     G +LD GCGAGVL   L    P+ R+TL DV A AV ASR TL
Sbjct: 181 LDTGSKLLLSTLTPHTKGKVLDVGCGAGVLSTVLASHSPKVRLTLCDVSAPAVEASRATL 240

Query: 236 AANGLEGEVISGDGIDAAPTELSLILSNPPFHTGVHTNYQASENLLKKSAVHLRKGGEMR 295
           AANG+EGEVI+ +          +I+SNPPFH G+ T+ +A++ L++ +  HL  GGE+R
Sbjct: 241 AANGIEGEVIASNVFSDVTGRFDMIISNPPFHDGMETSLEAAQTLIRGATRHLNSGGELR 300

Query: 296 LVANSFLRYQPLIEGALGNCQVRDEADGFRIYQ 328
           +VAN+FL Y  +++   G  +V  +   F++Y+
Sbjct: 301 IVANAFLAYPKVLDETFGFHEVIAQTGRFKVYR 333