Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

Subject, 338 a.a., Ribosomal RNA small subunit methyltransferase C from Acinetobacter radioresistens SK82

 Score =  293 bits (750), Expect = 4e-84
 Identities = 153/337 (45%), Positives = 215/337 (63%), Gaps = 10/337 (2%)

Query: 1   MDPRSEVLLRQAELFQGPLLIAGAPADDLLGQLP---QAQAWTWHAGDQAMLESRFAG-R 56
           MDPRSEV+LRQ +   G +L   AP D LL QL     A  WTW+  D    ++  AG +
Sbjct: 1   MDPRSEVVLRQIDQLSGQVLFIHAPNDQLLNQLGPRIDASIWTWNFSDYQGFQA--AGFK 58

Query: 57  SHYGVEAPEAAFDSAVLFLPKSRELAAYLLNALASRLA-GRELYLVGEKRGGIEGAAKQL 115
           +H+GV+ P+  F+  V+F+PKS+EL  Y+L+ + S L  G+ ++LVGEK+GG+E AAKQL
Sbjct: 59  THFGVDFPQQQFNQVVIFVPKSKELLNYVLHNIVSHLEIGQSVFLVGEKKGGVERAAKQL 118

Query: 116 QAFGKPRKLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQVVSLPGVFSHGR 175
             FG P KLDSARHCQ WQ+ ++   Q KPLES  + + + L+D  +++ +LPGVFS   
Sbjct: 119 HTFGHPVKLDSARHCQFWQLKLEHIEQQKPLESWLKTYTVQLKDQQIEICALPGVFSQSH 178

Query: 176 LDRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTL 235
           LD GTA+L+ +LD +  G + DFGCGAGV+   L +  P + V  LDVDAFA+ ++ LT 
Sbjct: 179 LDVGTAVLIPYLDQVKSGTLADFGCGAGVIACYLAKSNPANTVYALDVDAFALRSTELTF 238

Query: 236 AANGLEGEVISGDGIDA---APTELSLILSNPPFHTGVHTNYQASENLLKKSAVHLRKGG 292
             N +    +    + +   AP EL  I+SNPPFH G+HT+Y+ASE L K +  HL+ GG
Sbjct: 239 QRNQVPASQLRLQPVSSIADAPFELDAIVSNPPFHQGIHTHYEASEELCKTAPQHLKNGG 298

Query: 293 EMRLVANSFLRYQPLIEGALGNCQVRDEADGFRIYQA 329
           E+ +VAN FL Y  LIE   G C ++ +  GF++  A
Sbjct: 299 ELWIVANRFLNYPHLIEQRFGQCTLKADQQGFKVLYA 335