Pairwise Alignments

Query, 421 a.a., putative uracil permease from Pseudomonas putida KT2440

Subject, 500 a.a., uracil permease from Pseudomonas simiae WCS417

 Score =  137 bits (344), Expect = 1e-36
 Identities = 116/416 (27%), Positives = 198/416 (47%), Gaps = 34/416 (8%)

Query: 16  GAQMLFVAFGALVLMPLITG----LDPN-------VALFTAGIGTLLFQL---VTGRQVP 61
           G Q +   +G +V +PLI G    L P         +LF  G+ TLL  L     G Q+P
Sbjct: 25  GLQHVLTMYGGIVAVPLIVGQAAGLSPADIGLLIAASLFAGGLATLLQTLGLPFFGCQLP 84

Query: 62  VFLASSFAFITPIIL---AKGQFGLAETMGGVMAAGFVYTFMGLMVKIKGTGFIDRMLPP 118
           +    SFA +  ++    + G  G+   +G VMAA F+    GL++    +  I +  PP
Sbjct: 85  LVQGVSFAGVATMVAIVGSDGAGGVPAILGAVMAASFI----GLLITPVFSR-ITKFFPP 139

Query: 119 VVIGPVIISIGLAMAPIAANMAMGKGGDGTALMPYKTAMLISMPALLTTLIVAVFGKGIF 178
           +V G VI +IGL + P+AA  AMG G    A     + + ++   L+  L+++  G    
Sbjct: 140 LVTGIVITTIGLTLMPVAARWAMG-GNSRAADFGSMSNIGLAALTLVLVLLLSKIGSATI 198

Query: 179 RLVPIISGVLVGFALSFAFGVVDTARIAAAPWLEIP---NFTAPAFNWQAILFIVPVALA 235
             + I+  +++G  ++   G+ D + +   P    P   +F  P F+  AI+ +  V + 
Sbjct: 199 SRLSILLAMVIGTVIAVFLGMADFSGVTQGPMFGFPAPFHFGMPTFHVAAIISMCIVVMV 258

Query: 236 PAIEHIGGVIAVGSVTGRDYLKKPGLHRTLLGDGLATTAAGLFGGPPNTTYAEVTGAVML 295
             +E    ++AVG +       K  L   L  D L++  A +FG    + +A+  G V +
Sbjct: 259 TLVETSADILAVGEIIDTKVDSKR-LGNGLRADMLSSMFAPIFGSFTQSAFAQNVGLVAV 317

Query: 296 TKNYNPKIMTWAAVFAITLAFIGKFGALLQSIPVPVMGGILCLLFGSIAAVGMNTMIRHK 355
           T   +  ++    +F + L  +   G ++ ++P  V+GG   +LFG++AA G+ T+   K
Sbjct: 318 TGVKSRFVVATGGLFLVILGLLPFMGRVIAAVPTSVLGGAGIVLFGTVAASGIRTL--SK 375

Query: 356 IDLGEARNLVIVSVTLVFGIGGVLIGS-GDGPDDWGL----KGIALCAIVAIALNL 406
           +D     NL+IV+ ++ FG+  +   S  D    W       GI+  AI+AI LNL
Sbjct: 376 VDYRNNMNLIIVATSIGFGMIPIAAPSFYDHFPSWFATIFHSGISSSAIMAILLNL 431