Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 491 a.a., Deoxyribodipyrimidine photo-lyase from Xanthobacter sp. DMC5

 Score =  282 bits (722), Expect = 2e-80
 Identities = 184/486 (37%), Positives = 247/486 (50%), Gaps = 32/486 (6%)

Query: 3   LTWLRSDLRIDDNTALSASTERGPTIALWLVSPGQWQAHDDADCKVDFWL-RNLHDLRQS 61
           L W R DLR+ DN AL+A  E G  IA   V                +WL ++L  LR  
Sbjct: 7   LLWFRDDLRLADNPALNALAETGAPIAALYVLDEDSPHIRPLGAAARWWLAQSLRALRAD 66

Query: 62  LEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEKSA 121
           L    IPL++R       A + V ++       +V +N+  G  E + D A  A L    
Sbjct: 67  LSHHGIPLILRQ----GPATRIVPEVAAALGAATVAFNDRAGEAEGKLDRAITARLAAED 122

Query: 122 IQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALA-RRVKRQAPLNIG 180
            +       L   PGTVL  SG   + FS F +  L     S P  A +R+K      + 
Sbjct: 123 RRVLHFCAHLLHPPGTVLGGSGRMPRTFSSFHRAALRERDLSPPLPAPKRLK-----GVT 177

Query: 181 SDPIPQHVEGFGKTTP------ALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKP 234
             P    +E F            LR  W  GEA A+ RLS F+ + +  Y   RD P   
Sbjct: 178 RAPEGDTLESFALEPEKPDWAGGLRTAWHVGEAAARQRLSAFIADGLKGYATGRDRPDLE 237

Query: 235 GTSQLSPYLAAGVISPRQCLHGALAGNRGEFDSGS---TGVQTWINELLWREFYKHILSG 291
             S+LSP+L  G +SPRQ         R   D+G    +    +  EL WREF  H+L+ 
Sbjct: 238 HVSRLSPHLRFGEMSPRQIFFAV----RHAVDAGEVPGSDAAKFEAELYWREFSYHLLAE 293

Query: 292 YPQVSRHRAFRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVV 351
            P ++R R  +   +A PWR+   +L AW +G TG+P++DA MRQL  TGWMHNR+RMVV
Sbjct: 294 DPDIAR-RNIQQSFDAFPWRECSGELKAWRRGLTGYPLVDAGMRQLWQTGWMHNRVRMVV 352

Query: 352 AMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQR 411
           A FL+K+LLIDWR GE  F   L+D D A N   WQW A +G DA PYFRIFNPV Q ++
Sbjct: 353 ASFLAKHLLIDWRAGEDWFWDTLVDADAANNAASWQWVAGSGLDAAPYFRIFNPVMQGEK 412

Query: 412 FDPQGRFIRHWVPELQELDEKAIHQP-------IKSTDLFGNTSYLSPIVDLSSSRQRAL 464
           FDP G ++R +VPEL+ L  K IHQP       + +  +    +Y  P+VD +++R RAL
Sbjct: 413 FDPDGTYVRTYVPELKRLPAKLIHQPWTAPQDTLAAAGIRLGHTYPKPLVDHAAARDRAL 472

Query: 465 EAFKGL 470
            AF+ L
Sbjct: 473 RAFEHL 478