Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 499 a.a., deoxyribodipyrimidine photo-lyase from Variovorax sp. OAS795

 Score =  276 bits (707), Expect = 9e-79
 Identities = 174/486 (35%), Positives = 265/486 (54%), Gaps = 33/486 (6%)

Query: 3   LTWLRSDLRIDDNTAL-SASTERGPTIALWLVSPGQWQAHDDADCKVDFWLRNLHDLRQS 61
           L W R DLR+DDN AL  A       + +++            D +V+F   +L +L   
Sbjct: 16  LMWFRRDLRVDDNAALYHALRSCRQVVCVFVFDRAILDPLPRIDRRVEFIRESLVELDAG 75

Query: 62  LEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEKSA 121
           L++L+  L++R     D+ P     +  +  VQ+V  N +   +   RD      L  + 
Sbjct: 76  LQELSGGLIVRHAAALDEIPA----LAHELDVQAVFANRDDEPDALARDAQVLGALANAG 131

Query: 122 IQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVKRQA-----P 176
           +  H+  D   F    VLT++G  + VF+ +K++ L  +  S    + +V+  A     P
Sbjct: 132 VTFHTFKDSTVFDRDEVLTKTGQPYTVFTPYKRSWLAKVD-SFFLKSYQVRTHADALAPP 190

Query: 177 LNIGSDPIPQHVE-GFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKPG 235
                 P+P   E GFGK+  +  +  P G + A +    F  + ID Y   R+ PA  G
Sbjct: 191 PGAYRAPVPSLEEIGFGKSNLSALEI-PTGSSGAAALFEDFF-QRIDRYDAARNFPAVRG 248

Query: 236 TSQLSPYLAAGVISPRQCLHGALAGNRGEFD-SGSTGVQTWINELLWREFYKHILSGYPQ 294
            S L  +L  G +S RQ     LAG   +    G  G  TW++EL+WR+FY  IL+ +P 
Sbjct: 249 PSYLGVHLRFGTVSVRQ-----LAGVAHQLSLQGDAGAATWLSELIWRDFYFQILAHFPH 303

Query: 295 V---SRHRAFRAQTEALPW---RDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLR 348
           V      ++FR + + + W   + A     AW QGRTG+P++DAAM Q+  +G+MHNRLR
Sbjct: 304 VHSGGESKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDAAMLQINQSGYMHNRLR 363

Query: 349 MVVAMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQ 408
           MVVA FL K+L +DWR+GER+F  HL D +LA+NNGGWQW++S+G DA PYFRIFNPV+Q
Sbjct: 364 MVVASFLCKDLGLDWRRGERYFALHLNDFELASNNGGWQWASSSGCDAQPYFRIFNPVTQ 423

Query: 409 SQRFDPQGRFIRHWVPELQELDEKAIHQP-------IKSTDLFGNTSYLSPIVDLSSSRQ 461
           S+RFDP+G+FIR ++P+L  L   AIH P       +++  +    +Y  P+VD + +R+
Sbjct: 424 SERFDPEGKFIRRYLPQLAGLSNAAIHAPWMASPVELEAAGIKLGENYPRPVVDHAEARE 483

Query: 462 RALEAF 467
           + L+ +
Sbjct: 484 KTLQRY 489