Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 458 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Sphingobium sp. HT1-2

 Score =  224 bits (570), Expect = 6e-63
 Identities = 161/481 (33%), Positives = 237/481 (49%), Gaps = 47/481 (9%)

Query: 3   LTWLRSDLRIDDNTALSASTERGPTIALWLV---SPGQWQAHDDADCKVDFWLRN-LHDL 58
           + W R DLR+ D  AL+A+ + GP I L+++   SP QW     +     +WL + L  L
Sbjct: 6   IIWFRQDLRLSDQAALAAAAQAGPVIPLYILDDESPRQWAMGGASR----WWLHHSLASL 61

Query: 59  RQSLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLE 118
            + L      L++R     D   Q   + C    V ++  +E +  N ++          
Sbjct: 62  DERLRAKGSRLILRRGRCADVLAQVAKE-CGAQVVHAIRHHEPWWRNAEKG--------V 112

Query: 119 KSAIQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVKRQAPLN 178
              I    H   L      V T  G  +++++ F +  + H+  + P  A + + +AP +
Sbjct: 113 ARQIDLRLHDGGLLLPVEAVRTGGGTPYRIYTPFSRAVMLHMPPAPPQPAPQ-RIEAPSH 171

Query: 179 IGSDPIPQHVEGFGKT------TPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPA 232
               P    +EG+                W  GE  A+  L  FL E + DY   RDLP+
Sbjct: 172 W---PDSDRLEGWNLLPRDPDWASGFPADWSPGEEGAKRYLDSFLGE-VGDYAVARDLPS 227

Query: 233 KPGTSQLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSGY 292
           + GTS+LSP+L  G ISP +  H  +A   G+          ++ EL+WR++  + +   
Sbjct: 228 QEGTSRLSPHLHFGEISPAKVWH-RVAKAPGD-------ATVYLKELIWRDYAHNQVWAL 279

Query: 293 PQVSRHRAFRAQTEALPWRD---APADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRM 349
           P      A  A  +A+ WRD   A  D  AW++G+TG+PI+DA MRQL  TGWMHNR+RM
Sbjct: 280 PAYGSENAQPA-FDAMHWRDLREARGDWTAWKRGQTGYPIVDAGMRQLWQTGWMHNRVRM 338

Query: 350 VVAMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQS 409
           + A FL K+LLIDWR G R F   L+D D A N+  WQW A +G DA  + RI  P++QS
Sbjct: 339 IAASFLIKHLLIDWRHGARWFWDTLVDADYANNSVNWQWVAGSGVDANLFTRIMAPLTQS 398

Query: 410 QRFDPQGRFIRHWVPELQELDEKAIHQPIKSTDLFG--NTSYLSPIVDLSSSRQRALEAF 467
            +FD    +IR WVPEL  LD+  IH P    D  G   +SY    +     R+RAL A+
Sbjct: 399 DKFD-AADYIRQWVPELAHLDDCVIHDP----DFHGVRPSSYPEKRIGHREGRERALTAY 453

Query: 468 K 468
           +
Sbjct: 454 R 454