Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 473 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  379 bits (973), Expect = e-109
 Identities = 200/474 (42%), Positives = 283/474 (59%), Gaps = 17/474 (3%)

Query: 2   HLTWLRSDLRIDDNTALSASTERGPT--IALWLVSPGQWQAHDDADCKVDFWLRNLHDLR 59
           HL W R DLR+ DN AL+A+        +AL++ +P QWQAHD A  +  F    L+ L+
Sbjct: 4   HLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHDMAPRQAAFISAQLNALQ 63

Query: 60  QSLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEK 119
            +L +  IPLL   +  ++ + + V ++CRQH V  + +N +Y  NE++RD A    L  
Sbjct: 64  TALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEFNERQRDAAVEKTLPS 123

Query: 120 SAIQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPAL--ARRVKRQAPL 177
              +     D +   PG V+T + + ++VF+ FK   L+ L   +P    A +++    L
Sbjct: 124 VICEGFD--DSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDIPPCVPAPKIRVSGAL 181

Query: 178 NIGSDPIPQHV--EGFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKPG 235
           +    P+  +   + F          +P  E    ++L +F  +  D+Y   RD PA  G
Sbjct: 182 STPLTPVSLNYPQQAFDAAL------FPVEENAVIAQLRQFCAQGADEYALRRDFPAVDG 235

Query: 236 TSQLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSGYPQV 295
           TS+LS  LA G +SPRQCLH  LA      D G   V  W+NEL+WREFY+H+++ YP +
Sbjct: 236 TSRLSASLATGGLSPRQCLHRLLAEQPQALDGGPGSV--WLNELIWREFYRHLMTWYPAL 293

Query: 296 SRHRAFRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVVAMFL 355
            +H+ F   T+ + W++ P    AW++G TG+PI+DAAMRQL  TGWMHNRLRM+ A FL
Sbjct: 294 CKHQPFIRWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFL 353

Query: 356 SKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQ 415
            K+LLIDWR GER+FM  LIDGDLAANNGGWQW+ASTGTDA PYFRIFNP +Q +RFD  
Sbjct: 354 VKDLLIDWRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRD 413

Query: 416 GRFIRHWVPELQELDEKAIHQPIKSTDLFGNT-SYLSPIVDLSSSRQRALEAFK 468
           G FIR W+P L+++  KAIH+P +  +  G    Y  PIV+   +R   L A++
Sbjct: 414 GEFIRQWLPALRDIPGKAIHEPWRWAEKAGVVLDYPRPIVEHKQARIATLSAYE 467