Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 476 a.a., deoxyribodipyrimidine photo-lyase from Dickeya dianthicola ME23

 Score =  395 bits (1015), Expect = e-114
 Identities = 212/474 (44%), Positives = 285/474 (60%), Gaps = 16/474 (3%)

Query: 2   HLTWLRSDLRIDDNTALSASTER--GPTIALWLVSPGQWQAHDDADCKVDFWLRNLHDLR 59
           HL W R DLR+ DN AL A+ +       A+++ +P QW +H  A C+  F L NL  L+
Sbjct: 4   HLVWFRHDLRLTDNLALHAACQDPDARVEAVFIATPQQWASHAMAPCQAAFLLDNLRCLQ 63

Query: 60  QSLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEK 119
           Q+L +  IPL  R  D +  + + + D CR+ Q   + +N +Y  NE++RD      L  
Sbjct: 64  QALGEKGIPLHYRQCDDFAASVRWLADFCRERQATHLFYNRQYEWNERQRDRQLEQALA- 122

Query: 120 SAIQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHR----SLPALARRVKRQA 175
              +     D L   PG+V+T SGD ++VF+ F+   L+ L +    S+P  A R  RQ 
Sbjct: 123 GVSECRGFDDSLLLPPGSVVTGSGDMYKVFTPFRTAFLKCLQQRDVASVPTPAAR--RQG 180

Query: 176 PLNIGSDPIPQHVEGFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKPG 235
            + + S      +  F      +   +PAGE  A  RL +F  E +  YH  R+LPA   
Sbjct: 181 DITLAS------LAPFDYPQTDVHADFPAGEPAALQRLRQFCREQVMLYHEQRELPALAA 234

Query: 236 TSQLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSGYPQV 295
           TS+LSPYLA G++SPRQC +     +        +G  TW NEL+WREFY+H+L   P +
Sbjct: 235 TSKLSPYLALGILSPRQCFNRLRMEHPDWLARSDSGAFTWFNELVWREFYRHLLVFSPTL 294

Query: 296 SRHRAFRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVVAMFL 355
            +H+ F   T  + WR+AP +LAAW++G TG+PI+DAAMRQL  TGWMHNRLRM+ A FL
Sbjct: 295 CKHQPFIGWTRRVAWRNAPDELAAWQRGETGYPIVDAAMRQLNQTGWMHNRLRMICASFL 354

Query: 356 SKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQ 415
            K+LL DWR+GER+FM  L+DGDLAANNGGWQW+ASTGTDA PYFRIFNP +Q +RFDP 
Sbjct: 355 VKDLLHDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPD 414

Query: 416 GRFIRHWVPELQELDEKAIHQPIK-STDLFGNTSYLSPIVDLSSSRQRALEAFK 468
           G FIR WVPEL ++  KA+HQP   +        Y  PIVD   +R R L AF+
Sbjct: 415 GEFIRRWVPELAQIPGKAVHQPHHWAARQQRQIDYPLPIVDHKQARTRTLAAFE 468