Pairwise Alignments

Query, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

Subject, 479 a.a., DNA photolyase from Agrobacterium fabrum C58

 Score =  271 bits (694), Expect = 3e-77
 Identities = 169/488 (34%), Positives = 247/488 (50%), Gaps = 37/488 (7%)

Query: 3   LTWLRSDLRIDDNTALSASTERG-PTIALWLVSPGQWQAHDDADCKVDFWLRN-LHDLRQ 60
           + W R DLR+ DN AL A+ E G P I +++    + ++        ++WL + L  L  
Sbjct: 9   IVWFRKDLRLSDNLALLAAVEHGGPVIPVYI----REKSAGPLGGAQEWWLHHSLAALSS 64

Query: 61  SLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEKS 120
           SLEK    L++ + D    A + + D+  +    +V WN  Y       D A +  L   
Sbjct: 65  SLEKAGGRLVLASGD----AERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRDD 120

Query: 121 AIQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVKRQAPLNIG 180
            +   S   QL   P  + T+SG  ++V++ F +          PA         P ++ 
Sbjct: 121 GLTVRSFSGQLLHEPSRLQTKSGGPYRVYTPFWRALEGSDEPHAPA-------DPPKSLT 173

Query: 181 SDPIPQHVEGFG--KTTPA-------LRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLP 231
           +  +    E     K  P          D W  GE  A  +L  F+D  +  Y   RD P
Sbjct: 174 APKVWPKSEKLSNWKLLPTKPDWAKDFSDIWTPGETGALDKLDDFIDGALKGYEEGRDFP 233

Query: 232 AKPGTSQLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSG 291
           AKP TS LSP+LAAG ISP    H     +R      S  +  +  E++WREF  H+L  
Sbjct: 234 AKPATSLLSPHLAAGEISPAAVWHATKGLSR---HIASNDISRFRKEIVWREFCYHLLFH 290

Query: 292 YPQVSRHRAFRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVV 351
           +P++   + +    +A  WRD      AW +G TG+PI+DA MRQL   G MHNR+RM+V
Sbjct: 291 FPELGE-KNWNDSFDAFSWRDDEKSFKAWTRGMTGYPIVDAGMRQLWQHGTMHNRVRMIV 349

Query: 352 AMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQR 411
           A FL K+LLIDWRKGE+ F   L+D D A+N   WQW A +G DA P+FRIFNP+ Q ++
Sbjct: 350 ASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEK 409

Query: 412 FDPQGRFIRHWVPELQELDEKAIHQP-------IKSTDLFGNTSYLSPIVDLSSSRQRAL 464
           FD  G ++R +VPEL++L+ K IH+P       +K   +    +Y  PIVD   +R+RAL
Sbjct: 410 FDGDGDYVRRFVPELEKLERKYIHKPFEAPKDALKKAGVELGKTYPLPIVDHGKARERAL 469

Query: 465 EAFKGLPR 472
            A+  + +
Sbjct: 470 AAYAAVKK 477