Pairwise Alignments

Query, 360 a.a., Peptide chain release factor 1 from Pseudomonas putida KT2440

Subject, 376 a.a., Peptide chain release factor RF2 from Xanthobacter sp. DMC5

 Score =  195 bits (495), Expect = 2e-54
 Identities = 119/338 (35%), Positives = 187/338 (55%), Gaps = 9/338 (2%)

Query: 15  RFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQALLKDSDP 74
           R  EL A++ D ++  D  R +   +E   +E    A     +V+ DL     L+   + 
Sbjct: 31  RLAELNAIVEDPKLWDDPERAQKLMQERTSLEDGLGAID---RVERDLADNIELIDLGEA 87

Query: 75  DLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLF 134
           +  E  + E   A + L    A+ +   L     D  + +LE+ AG GG ++  ++  L 
Sbjct: 88  EGDEGVISEAAGALDGLKAELARRELEALLSGEADSNDSYLEVHAGAGGTDSQDWAEMLL 147

Query: 135 RMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQRVPETES 194
           RMY R+ E+ G+++E++ E++GE  G K    +V+G N YG LK E+G HR+ R+   +S
Sbjct: 148 RMYRRWCERHGFKVELMDESQGEQAGLKSATIQVKGHNAYGWLKTEAGVHRLVRISPFDS 207

Query: 195 QGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRITHLPTG 254
             R  TS  +V V P  D++  ++I  AD+RVDT R+ GAGGQHVNKT+SA+R+TH+PTG
Sbjct: 208 NARRQTSFASVDVYPVVDDRIVVDIKEADVRVDTMRSGGAGGQHVNKTESAVRLTHIPTG 267

Query: 255 IVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNALASER--KLLVGSGDRSERIRTY 312
           I V  + +RSQHKNRA A + L AKL D++    +    +E+  K  +G G    +IR+Y
Sbjct: 268 IAVVSEGDRSQHKNRATAWNMLRAKLYDLELKKREAEAMAEQAAKTDIGWG---HQIRSY 324

Query: 313 -NYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAE 349
              P   V D R  +T  +  ++L G +D  ++  LA+
Sbjct: 325 VLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMQAALAQ 362