Pairwise Alignments

Query, 573 a.a., conserved hypothetical TPR repeat protein from Pseudomonas putida KT2440

Subject, 829 a.a., TPR domain protein, putative component of TonB system from Variovorax sp. SCN45

 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 82/371 (22%), Positives = 140/371 (37%), Gaps = 31/371 (8%)

Query: 171 LHSFERLLVKYPDNGQLIFGKALLLNQDGKTEEALELLESHPAQNGEVAPILLRARLLQA 230
           L  +E LL ++P++   +      L + G+ + AL  +    A++        RA +   
Sbjct: 37  LRIYENLLSQFPEHADALHLTGEALYRQGRPKLALNYVNRAIAKSPHHFYFNTRATIFMH 96

Query: 231 LDRGPEALPLLRGAIRDNPDDKRLRLTYARTLVEQDRIADAKGEFISLVQQYPDDDELRY 290
           +    EA   LR AI+  P+     +  +    +Q +   A+       +  P       
Sbjct: 97  MGLLAEAQQDLRRAIKALPNYPEAYVNLSAVYRQQKKFRQAREAAGEATRLAPQSPAAWN 156

Query: 291 SLALVCLENKDWDEAEGYLQELVERDSYVDAAHLNLGRIHEERHDPAGALREYALVGPGP 350
           +   + +E    +EA    ++ ++ DS   AAH N+G+I   + D AGAL         P
Sbjct: 157 NAGAIDMEQDRLEEAVEQFRQALKLDSGYIAAHKNIGKIRAHQKDWAGALTSLEQAQTDP 216

Query: 351 DYLPAQLRQADILIANGRGTEASRLLADAREAQPDYAIQLFLIESESYSNNNKDAQANQV 410
               A    +  LIA GR  EA   +A  + A     ++   + + + S+          
Sbjct: 217 PDFEAAYLLSRALIACGRNEEA---IAPMQRAMRHSTVE---VRARALSD---------- 260

Query: 411 LQQAIQRYPDDLNLLY-TRAMLAEKRNDLTQMEKDLRAIITREPENAMALNALGYTLADR 469
                   P+ +  LY   A L        + E+  +  +   PE    LN LG T   R
Sbjct: 261 --------PEAVAALYGVCAALEGAAMRFDESEELYKLALESMPEQEALLNNLGAT-NFR 311

Query: 470 TTRYTEAKALIDKAHQLTPDDPAVLDSLGWVNYRLGNLDAAETYLRQAFANFPDHEVAAH 529
             RY  A  ++ KA +L P       +LG      G  +AA     Q   + PD   A  
Sbjct: 312 QGRYDAAIEVLKKALELHPRQVLARCNLGVTYVMAGQSEAAIAEFEQCLRDDPDFMPA-- 369

Query: 530 LGEVLWANGKR 540
              ++W  G++
Sbjct: 370 ---MVWLLGEK 377



 Score = 45.4 bits (106), Expect = 9e-09
 Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 13/196 (6%)

Query: 367 GRGTEASRLLADAREAQPDYAIQLFLIESESYSNNNKDAQANQVLQQAIQRYPDDLNLLY 426
           GR TEA R+  +     P++A  L L     Y         N V  +AI + P       
Sbjct: 31  GRFTEALRIYENLLSQFPEHADALHLTGEALYRQGRPKLALNYV-NRAIAKSPHHF-YFN 88

Query: 427 TRAMLAEKRNDLTQMEKDLRAIITREPENAMALNALGYTLADRTTRYTEAKALIDKAHQL 486
           TRA +      L + ++DLR  I   P    A   L      +  ++ +A+    +A +L
Sbjct: 89  TRATIFMHMGLLAEAQQDLRRAIKALPNYPEAYVNLSAVYRQQK-KFRQAREAAGEATRL 147

Query: 487 TPDDPAVLDSLGWVNYRLGNLDAAETYLRQAFANFPDHEVAAHLGEVLWANGKRREARQV 546
            P  PA  ++ G ++     L+ A    RQA        +AAH        GK R  ++ 
Sbjct: 148 APQSPAAWNNAGAIDMEQDRLEEAVEQFRQAL-KLDSGYIAAHKN-----IGKIRAHQKD 201

Query: 547 WAKGF----EAQADSP 558
           WA       +AQ D P
Sbjct: 202 WAGALTSLEQAQTDPP 217



 Score = 29.6 bits (65), Expect = 5e-04
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 489 DDPAVLDSLGWVNYRLGNLDAAETYLRQAFANFPDHEVAAHL-GEVLWANGKRREA 543
           D+ + L   G   +R+G    A        + FP+H  A HL GE L+  G+ + A
Sbjct: 15  DEASRLLEQGLTQHRMGRFTEALRIYENLLSQFPEHADALHLTGEALYRQGRPKLA 70