Pairwise Alignments

Query, 573 a.a., conserved hypothetical TPR repeat protein from Pseudomonas putida KT2440

Subject, 614 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 82.4 bits (202), Expect = 5e-20
 Identities = 133/578 (23%), Positives = 217/578 (37%), Gaps = 40/578 (6%)

Query: 3   KPYALLLAFALLQGCQSLAPQKAEPPVAEAGKGEAEKPVVYGSFKQDTLY-SLLVAELAG 61
           KP   LL  A L    ++    A P  AE      +K V +   K +T   + L    A 
Sbjct: 4   KPALRLLCSAALAAALAIGAG-ASPGFAETKAKPEDKAVTFDPGKVNTFSGAFLAGRNAD 62

Query: 62  QRNRFDIALANYTDQAAKTQDPAVSERAYR--IAEYLGADEPSLENALVWARNDPQNLDA 119
               +  A++ Y  + A   DPA SE   R  IAE L  +    E     A +   +   
Sbjct: 63  VDQDYPTAISLY--KKALEYDPANSEIRQRLMIAELLSGN---FEAGAKIADSMKDDTSV 117

Query: 120 QRAAAIQLARAGRYDESMTYMEKVLQGQGDTHFDFLALSAAETDQSTRDGLLHSFERLLV 179
           +R   I        D+  T  EK+L+  G    D +  +          G       L+ 
Sbjct: 118 ERVTTIVRGLDAIKDKEFTKAEKILKYTGPNDLDRMVNTLLTAWARAGSGKPKEALALVN 177

Query: 180 KYPDNGQL-IFGK---ALLLNQDGKTEEALELLESH--------PAQNGEVAPILLRARL 227
                G + IF K   A +    G TE A + L            A +  +  ++  ARL
Sbjct: 178 NMKGPGWISIFQKYNAAAIALVSGNTEAARKSLNEAVTDREGGATASDTYMRAVMALARL 237

Query: 228 LQALDRGPEALPLLRGAIRDNPDDKRLRLTYARTLVEQDRIADAKGEFISLVQQYPDDDE 287
             +     +AL  +  A+ D        L   R  +E+    + +     +         
Sbjct: 238 EASAGNKQKALDAI--AVGDTFAPNYAPLKALREAIEKGEKPEQQ-----ITNAVEGAAS 290

Query: 288 LRYSLALVCLENKDWDEAEGYLQELVERDSYVDAAHLNLGRIHEERHDPAGALREYALVG 347
           + +S+A         +    YLQ     D       + LG + E    P  A+  Y  V 
Sbjct: 291 VMFSIAGALNREGAEEIVTLYLQTSRALDPKSPDTLILLGGLAEAMKQPERAITFYREVP 350

Query: 348 P-GPDYLPAQLRQADILIANGRGTEASRLLADAREAQPD-----YAIQLFLIESESYSN- 400
              P +  ++L+    L   G+  E+ + L    E+ P       A    L +++ Y   
Sbjct: 351 KDSPMHRISELQLGLTLAQTGKVEESRKHLLSLLESDPKDIRSYLAYGSVLSDAKDYKAM 410

Query: 401 -NNKDAQANQVLQQAIQRYPDDLNLLYTRAMLAEKRNDLTQMEKDLRAIITREPENAMAL 459
             N D +A +V+    Q+   D ++ + R +  E+     + E + +  +   PE    L
Sbjct: 411 AENYD-KAVEVIGAVPQK--SDWSVFFQRGIAYERLKQWDKAEPNFKRALELNPEQPQVL 467

Query: 460 NALGYTLADRTTRYTEAKALIDKAHQLTPDDPAVLDSLGWVNYRLGNLDAAETYLRQAF- 518
           N LGY+  D+     E   +I +A +L P+D  ++DSLGW +YRLG+ D + T L +A  
Sbjct: 468 NYLGYSWVDKGINLDEGMKMISRAVELRPNDGYIVDSLGWAHYRLGDFDQSVTELERAIE 527

Query: 519 ANFPDHEVAAHLGEVLWANGKRREARQVWAKGFEAQAD 556
               D  +  HLG+  W  G++ EA   W +      D
Sbjct: 528 LKAGDPTINDHLGDAYWRVGRKIEAVYQWNRALIGDND 565



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 55/271 (20%), Positives = 111/271 (40%), Gaps = 38/271 (14%)

Query: 104 ENALVWARNDPQNLDAQRAAAIQL----ARAGRYDESMTYMEKVLQGQGDTHFDFLALSA 159
           E A+ + R  P++    R + +QL    A+ G+ +ES  ++  +L+        +LA  +
Sbjct: 340 ERAITFYREVPKDSPMHRISELQLGLTLAQTGKVEESRKHLLSLLESDPKDIRSYLAYGS 399

Query: 160 AETDQSTRDGLLHSFERLLVKYPDNGQLIFGKALLLNQDGKTEEALELLESHPAQNGEVA 219
             +D                           KA+  N D    +A+E++ + P Q  + +
Sbjct: 400 VLSDAKDY-----------------------KAMAENYD----KAVEVIGAVP-QKSDWS 431

Query: 220 PILLRARLLQALDRGPEALPLLRGAIRDNPDDKRLRLTYARTLVEQDRIADAKGEFIS-L 278
               R    + L +  +A P  + A+  NP+  ++      + V++    D   + IS  
Sbjct: 432 VFFQRGIAYERLKQWDKAEPNFKRALELNPEQPQVLNYLGYSWVDKGINLDEGMKMISRA 491

Query: 279 VQQYPDDDELRYSLALVCLENKDWDEAEGYLQELVERDSYVDAAHLNLGRIHEERHDPAG 338
           V+  P+D  +  SL        D+D++   L+  +E  +     + +LG  +        
Sbjct: 492 VELRPNDGYIVDSLGWAHYRLGDFDQSVTELERAIELKAGDPTINDHLGDAYWRVGRKIE 551

Query: 339 ALREY--ALVGPGPDYLPAQLRQADILIANG 367
           A+ ++  AL+G   D   A++++    IANG
Sbjct: 552 AVYQWNRALIGDNDDVDKAKVKEK---IANG 579