Pairwise Alignments

Query, 365 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score =  132 bits (333), Expect = 1e-35
 Identities = 105/352 (29%), Positives = 155/352 (44%), Gaps = 34/352 (9%)

Query: 1   MSDATPTPPPSAPDRGIR----WVLLLIAVSLL-------WYLLADRYTPYTQQARLQAY 49
           M+  T TP PS      R    W+L L+ + +L       WY +  R+   T  A +   
Sbjct: 1   MATPTDTPTPSVAPEPSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGN 60

Query: 50  VVPVAAEVAGQIKRVAVGNNQEVRQGDVLFELDQEQYRIALARAEADLDTVRRQIGASTA 109
           VV +   VAG +  +   +   V  G VL + D     +AL  AEA L    RQ+    +
Sbjct: 61  VVEITPLVAGTVTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYS 120

Query: 110 GIDSAQAALVAAQANERKARQDAERLKRLIDEDPGTVSVRRLEGAQATRDQAISQVAAAR 169
            +DS +A L   QA  RKA+QD  R K L D   G ++   L  A+         ++ A+
Sbjct: 121 NVDSLKAQLETRQAELRKAQQDFNRRKVLADS--GAIAAEELSHAR-------DDLSVAQ 171

Query: 170 AEVERAREQQGGAQ--------EDNAQLRSAAANLEKARLDLARTVVRADANGLITDLRT 221
           A V  AR+Q   +           +  + +AAA+L +A LD ART + A   G +     
Sbjct: 172 AAVNSARQQLSTSSALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTV 231

Query: 222 DVGHYVGAGSPMMTLISIHDVWISADMTENNLGRLRPETPVLVVLDALPGTV-LKGRIRS 280
            +G  +  G+  M +I +  VWI A+  E  L  +R   PV +  D     V   G + S
Sbjct: 232 QLGQRLQPGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDS 291

Query: 281 IGYGVSVGQSTPPGTLPTVQNSREWLRSAQRFPVIIELERDQLQDKTVLRVG 332
           +G     G  +    LP    +  W++  QR PV I L  DQL+D   LR+G
Sbjct: 292 LG----AGTGSAFALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHP-LRIG 338