Pairwise Alignments

Query, 365 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 432 a.a., multidrug resistance efflux pump from Agrobacterium fabrum C58

 Score =  133 bits (334), Expect = 1e-35
 Identities = 114/352 (32%), Positives = 175/352 (49%), Gaps = 33/352 (9%)

Query: 4   ATPTPPPSAPDRGIRWVLL-LIAVSLL----WY----LLADRYTPYTQQARLQAYVVPVA 54
           ATP P  +AP    R  LL + A++LL    WY     +  R+   T  A +Q  +  +A
Sbjct: 65  ATPAPAVAAPKAKKRSPLLPIFALALLVGAGWYGYNWWIDGRFMVSTDDAYIQGDIAVIA 124

Query: 55  AEVAGQIKRVAVGNNQEVRQGDVLFELDQEQYRIALARAEADLDTVR---RQIGASTAGI 111
            +VAG + +V V  NQEV+ GD L  LD   YRIA  +A+A + T +   ++I A   G 
Sbjct: 125 PKVAGYVAKVNVVENQEVKAGDPLVTLDDGDYRIAFEQADAQIRTEQLSLKRIDAQIIGG 184

Query: 112 DSAQAALVAAQANERKARQDAE----RLKRLIDEDPGTVSVRRLEGAQATRDQAISQVAA 167
           ++AQ   VA +     A + AE    R   L  +D GTV+    + AQ   DQA + V A
Sbjct: 185 EAAQEQAVAQKGALDAALRGAEITQKRATELQAKDVGTVAAS--DNAQVALDQARANVVA 242

Query: 168 -------ARAEVERAREQQGGAQEDNAQLRSAAANLEKARLDLARTVVRADANGLITDLR 220
                  A+A VE  R Q+   +E  + +RS   + +KA  DLA TV++A  +G+I +L 
Sbjct: 243 GEAAISSAKANVELLRAQR---EEAESTIRSLQLSKDKAARDLAFTVLKAPYDGVIGNLA 299

Query: 221 TDVGHYVGAGSPMMTLISIHDVWISADMTENNLGRLRPETPVLVVLDALPGTVLKGRIRS 280
              G  V  G  + +L+ +++++I A+  E  L R+ P + V V +DA     ++G ++S
Sbjct: 300 VQTGDLVSVGKRLASLVPMNELYIDANFKETQLARVVPGSKVRVHVDAFDDEAIEGTVQS 359

Query: 281 IGYGVSVGQSTPPGTLPTVQNSREWLRSAQRFPVIIELERDQLQDKTVLRVG 332
           I    S G  +    LP    +  + +  QR PV I   ++ L  K  LR G
Sbjct: 360 I----SPGSGSVFSMLPPENATGNFTKVIQRVPVRIVFSKEDLA-KHNLRAG 406