Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 515 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  174 bits (441), Expect = 7e-48
 Identities = 142/477 (29%), Positives = 221/477 (46%), Gaps = 35/477 (7%)

Query: 8   LGLLMVLAGCTQVGPDFEKP------QAPWLDGW--STPMIEQAGRSAAAPDLRQWWAVF 59
           +GL ++L+ C  +GPD+++P      Q     GW  +TP  +   R A       WW ++
Sbjct: 47  MGLALLLSACA-IGPDYQRPEVVEPAQFKEAQGWRQATPS-DSLARGA-------WWELY 97

Query: 60  ADSTLDALIAEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSG 119
            D  L+ L+   +  N  +  A  R  +A+A LA    G +     LS       Q   G
Sbjct: 98  GDRQLNDLVMRLNTANQTVAQAEARFRQAQA-LARSSRGAFYPTVDLSVGKTRASQ---G 153

Query: 120 TPSARDSVFWQSS-------VGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLL 172
           T S+  S+   SS           + WE D WG+  R +E+ +A   AS A+ A   L  
Sbjct: 154 TGSSNASLSSSSSGIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQ 213

Query: 173 RAQVADTYFALRTAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATL 232
           ++++  +Y  LR  + +  + Q   +   RSL++TE  +R G + +    QA+TQ   T 
Sbjct: 214 QSELVQSYLQLRVMDEQTRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQ 273

Query: 233 ATIPEFENQLNALRNILCSLLGRPPGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDI 292
           A++ +   Q   L N +  L+G  P     L        LP   V   +P+ LL+RRPDI
Sbjct: 274 ASLIDLIWQRAQLENAIAVLIGEAPANF-NLAVSKDIPALPQIPV--SLPSQLLERRPDI 330

Query: 293 RAAEQAVAAQSALVGVAEADLYPQLSLLGSIGW---TFLSANHLPDTFDLAAGPSLIWNP 349
            +AE++V A +A +GVA+A  YP LSL  + G+   T+     LP+ F  + GP L    
Sbjct: 331 ASAERSVIAANANIGVAKAAYYPDLSLSLAGGYSSSTYADWISLPNRF-WSVGPKLAMTL 389

Query: 350 FDYGRRKNTVRVEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQ 409
           FD G+R   V    A   + +  Y+Q V +  RE ++    L      A +  +A +AA+
Sbjct: 390 FDGGQRSAEVDRTVASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALEAAR 449

Query: 410 RSLNLASSQYREGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWD 466
            SL L  +QY+ G   +  V+  Q   L  +   L      + + V L  ALGGGWD
Sbjct: 450 ESLRLTQNQYKAGLIAYLDVVTVQATALSNERTVLTLLQTRLVASVQLIAALGGGWD 506