Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  180 bits (457), Expect = 9e-50
 Identities = 148/466 (31%), Positives = 208/466 (44%), Gaps = 21/466 (4%)

Query: 8   LGLLMVLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAAAPDLRQWWAVFADSTLDAL 67
           L +L VL+GC  + P  +    P    W T         AAA DL  W A F D  L AL
Sbjct: 34  LVVLAVLSGCASLAPALDPIALPVASNWRTQ--PDTPGVAAAADLA-WRAYFTDPALQAL 90

Query: 68  IAEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSGTPSARDSV 127
           I  A  NN +LRVA LR  EA A        R  + QQ     + ++Q ++G P     +
Sbjct: 91  IETALENNRDLRVALLRTEEASAAF------RIQRAQQAPMVGVGVQQIRAGLPDGLQPL 144

Query: 128 FWQS-------SVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTY 180
             +S       SVG    WE+D WGR      +A   + A+   +    L L AQVAD Y
Sbjct: 145 AGRSVLEVNAASVGIS-SWELDLWGRVRSMKTAAFEQWLATGQGHRAVELALIAQVADAY 203

Query: 181 FALRTAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFEN 240
             LR  + R+A+A+   + Q    +I ++ F  G    L+  Q RT      A   + E 
Sbjct: 204 LGLRELDERIALARRTVENQQSLAQIFQKRFELGHGSRLELTQVRTLLSQGKALQVQLEL 263

Query: 241 QLNALRNILCSLLGRPPGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDIRAAEQAVA 300
           Q    RN L  LLG  P   P        L +P   ++  +P+ LL  RPDI AAE A+ 
Sbjct: 264 QREQQRNALALLLGSEPQLPPPSAPMDEALVMPE--LVHGLPSDLLLNRPDILAAEHALR 321

Query: 301 AQSALVGVAEADLYPQLSLLGSIGWTFLSANHL--PDTFDLAAGPSLIWNPFDYGRRKNT 358
           A+ A +G A A  +P+++L G  G    S + L    T      P++    FD G R+  
Sbjct: 322 ARQANIGAARAAFFPRIALTGGAGTVSTSLSDLFSSGTRAWLFQPTIELPIFDAGMRQAN 381

Query: 359 VRVEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASSQ 418
           + V   R    I  Y++ ++ A R+  DA +   +  +   +  QA  A    L LA   
Sbjct: 382 LDVSVVRRDIAIAEYERAIQAAFRDVSDALAARQKLAEQLAVARQAHAAQTERLKLARML 441

Query: 419 YREGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGG 464
           +  G A    VLDA++ LL      +  R  A+SS + LY ALGGG
Sbjct: 442 FDAGSAAHLEVLDAERDLLAVAQQLVQVRKAALSSQIGLYAALGGG 487