Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 477 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  183 bits (464), Expect = 1e-50
 Identities = 140/466 (30%), Positives = 216/466 (46%), Gaps = 18/466 (3%)

Query: 13  VLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAAAPDLRQWWAVFADSTLDALIAEAD 72
           VLAGC  + P++  P +P         +  +G  A  P    W + F +  L   I  A 
Sbjct: 20  VLAGCVNLAPEYTAPASP-----VPQALPSSGVEAPTPIDVSWRSFFVEPRLRGTIELAL 74

Query: 73  ANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSGTPSARDSVFWQSS 132
           ANN +LRVA L I  ARAQ  I +   +P ++  +  S   +    G+ S        S 
Sbjct: 75  ANNRDLRVAALNIERARAQYGIARASLFPTVEAGAGGS---RSRTPGSLSTGGEARIGSQ 131

Query: 133 VGFDIG---WEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFALRTAEAR 189
              D+G   +EID +GR     ESA   YF ++       + L A VA  +  L   E R
Sbjct: 132 YSADLGLTSYEIDLFGRVRNLGESALQSYFQTEETRRSTQISLIASVATAWLQLAADEQR 191

Query: 190 LAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQLNALRNIL 249
           L +A+   + Q +S ++ +R  R G    L   QA++   +  A    F++Q+   RN L
Sbjct: 192 LLLARNTLESQRKSFDLVQRSHRLGAQSGLALAQAQSTVDSARADAAAFDSQVEQDRNAL 251

Query: 250 CSLLGR--PPGPLPQLEAGHGQLPLPNRAVL---QDVPASLLQRRPDIRAAEQAVAAQSA 304
             L+G   P   LP   A     P     +L    D+P+S+L RRPD+RAAE A+ A +A
Sbjct: 252 ALLVGAMPPADLLPAAPASDTAAPADAARLLVPPPDLPSSVLNRRPDVRAAEHALRASNA 311

Query: 305 LVGVAEADLYPQLSLLGSIGW--TFLSANHLPDTFDLAAGPSLIWNPFDYGRRKNTVRVE 362
            +G A A  +P+++L  S G   + LS      +   +  PS+    FD G  +  +RV 
Sbjct: 312 DIGAARAAFFPRIALTASAGTASSTLSGLFAGGSQAWSFAPSISVPIFDGGANRANLRVA 371

Query: 363 DARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASSQYREG 422
           +A+ +  I  Y++ V+ A RE  DA +      +    +     A  RS  L+ S +R G
Sbjct: 372 EAQQKIQIATYEKAVQTAFREVADALAERRTLAERLDAQRSLLGATSRSFELSQSLFRSG 431

Query: 423 FADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWDAS 468
            + +  VLDAQ+     Q   +  +    ++ +T+YK LGGGW+ S
Sbjct: 432 ASSYLDVLDAQRAYYAAQQALIGLQLTEQTNRLTIYKTLGGGWEES 477