Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  197 bits (501), Expect = 7e-55
 Identities = 155/472 (32%), Positives = 238/472 (50%), Gaps = 34/472 (7%)

Query: 12  MVLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAA---APDLRQWWAVFADSTLDALI 68
           M++AGC  VGPD++ P  P    W    +E+  R +A   A D   WW  F D  LDAL 
Sbjct: 16  MLVAGCA-VGPDYKTPDTPLPVSWK---LEEPWRVSAPNDAADKGPWWRRFGDPQLDALQ 71

Query: 69  AEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQS------GTPS 122
            +A A +  L +A  R+A+ARA LA    G+YPQ+  L  ++  L+   +       TP+
Sbjct: 72  QQALAGSPTLAIANARLAQARATLAANAAGQYPQV-GLGTRASRLRISANRPLTNYATPN 130

Query: 123 ARDSVFWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFA 182
           +  +V    ++  +  +E+D  GR  R +E A A    S A+  +  LLL A VA +YF 
Sbjct: 131 S-TTVQNDFALSLNASYEVDLAGRVQRTVEGAKASAEQSAADLQNTRLLLSADVASSYFN 189

Query: 183 LRTAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQL 242
           LR+ +  L +   +   Q R+LE+       G    LD  Q ++    TL  +     Q 
Sbjct: 190 LRSTDIELDVVTRSIALQRRALELVTARHDLGAVSGLDVAQQQSLLETTLTQVDVLRKQR 249

Query: 243 NALRNILCSLLGRPPGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDIRAAEQAVAAQ 302
           +   + L +L G  P P   L     ++  P  AV   VP+ +LQRRPD+ +AE+A+AA 
Sbjct: 250 SQYEHALATLTG-TPAPSFSLPVDLREIRPP--AVPLGVPSEILQRRPDVASAERAMAAA 306

Query: 303 SALVGVAEADLYPQLSLLGSIGWTFLSANHLPDTFDLAAGPSLIWNP--------FDYGR 354
           +A +GVA A  YP + +  ++G   + +  +   F+   GPSL+W+         FD GR
Sbjct: 307 NAQIGVATAAFYPSIFISPTVG---VDSRTIETLFN---GPSLLWSVGVSATQVLFDGGR 360

Query: 355 RKNTVRVEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQAS-QAAQRSLN 413
            +  V    A     +  Y++ V  A +E +D  +GL  +L SAT + QA+  AA+R L+
Sbjct: 361 IRANVDFAKAGYDVTVGNYRRTVLTAMQEVEDGITGL-SALDSATAQAQAAVTAARRVLD 419

Query: 414 LASSQYREGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGW 465
           +A+S+Y  G + +  V+ AQQ LL  +      RG  + + V L KALGG W
Sbjct: 420 MATSRYEGGASTYLDVITAQQSLLTVERQAAQLRGQRLLTAVFLVKALGGDW 471