Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  207 bits (526), Expect = 9e-58
 Identities = 146/458 (31%), Positives = 230/458 (50%), Gaps = 9/458 (1%)

Query: 10  LLMVLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAAAPDLRQWWAVFADSTLDALIA 69
           L + LA C  VGPD++ P        S    +   RS        WW  F D  L+ L+ 
Sbjct: 12  LALALAACA-VGPDYQAPATEPAQLSSDVQAKAYDRSRFES---LWWKQFDDPVLNQLVQ 67

Query: 70  EADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSGTPSARDSVFW 129
            +   N +LRVA  R+  AR+     +   +P +   ++  L   Q    T    +S  +
Sbjct: 68  ASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQIPGQTTERVNSERY 127

Query: 130 QSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFALRTAEAR 189
              +G D+ WE+D +GR  R IE+++A    + A+     + L A++ D Y  LR A+ R
Sbjct: 128 D--LGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAYGQLRGAQLR 185

Query: 190 LAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQLNALRNIL 249
             IA  N K Q  S  ITE L   G  ++LD  +A  +     AT+P+ + +    R+ +
Sbjct: 186 EKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQAEQARARHRI 245

Query: 250 CSLLGRPPGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDIRAAEQAVAAQSALVGVA 309
            +LLG+ P  L  ++     LP   +A+    P  LL+RRPDIR+AE+ +AA +A VGVA
Sbjct: 246 ATLLGQRPDAL-SVDLSPKALPAIAKALPVGDPGELLRRRPDIRSAERQLAAATANVGVA 304

Query: 310 EADLYPQLSLLGSIGWTFLSANHLPDTF--DLAAGPSLIWNPFDYGRRKNTVRVEDARLQ 367
            ADL+P++SL G +G+T    + +  +     A GPS+ W  FD G  +  +R   A  +
Sbjct: 305 TADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGAKADAE 364

Query: 368 QLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASSQYREGFADFQ 427
             +  Y+Q V  A  E+ +A S   ++ Q      + S A++++  LAS +YREG  D+ 
Sbjct: 365 GALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELASIRYREGTVDYL 424

Query: 428 RVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGW 465
            +LDA++  L  +D       +    +V++YKALGGGW
Sbjct: 425 VLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGW 462