Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  220 bits (561), Expect = 8e-62
 Identities = 157/502 (31%), Positives = 231/502 (46%), Gaps = 43/502 (8%)

Query: 10  LLMVLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAAAPDLR-QWWAVFADSTLDALI 68
           L ++L GCT +GPDF++P +     W+    E A     A  L  +WW  F D+ L ALI
Sbjct: 12  LAVLLTGCT-LGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSALI 70

Query: 69  AEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQ-----DQSGTPSA 123
                 N +L++A  R+ ++RA  + +     P +   +  S          D SG    
Sbjct: 71  QRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADGLSDPSGKAGK 130

Query: 124 RDSVFWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFAL 183
                WQ  +    GWE+D WGR  R +E+ADA    ++ +    +L L ++ A  Y  L
Sbjct: 131 EAFNLWQGDLV--AGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQL 188

Query: 184 RTAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQLN 243
           R  +  L + Q+N +    SL++++     G    LD  QA  Q  +  + +P  E Q +
Sbjct: 189 RAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEAQRD 248

Query: 244 ALRNILCSLLGRPPGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDIRAAEQAVAAQS 303
            L N L  L   PP  L       G+LP P +     +P+ L +RRPDIR AE  + A +
Sbjct: 249 DLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIRQAEARLHAAT 308

Query: 304 ALVGVAEADLYPQLSLLGSIGWTFLSANHLP--DTFDLAAGPSLIWNPFDYGRRKNTVRV 361
           A +GVA+AD YP + L GS+G+  L  +     D+   A GP +    F+ GR K T+ +
Sbjct: 309 ASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLEL 368

Query: 362 EDARLQQLIELYQQGVREAAREADDA-----ASGLVRSLQSATIREQASQAAQRSLNLAS 416
            +A+ Q+    Y++ V  A  E DD      AS L R   +  +R+      + +L  A 
Sbjct: 369 REAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQN-----RIALETAQ 423

Query: 417 SQYREGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWDASRAPIDPAT 476
            QY EG  DF  VL  Q  LL  ++ ++ S      +LV LYKALGGGW A         
Sbjct: 424 RQYVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQA--------- 474

Query: 477 RQQMQQRTDWGELLDEPAPTAH 498
                         DEP P AH
Sbjct: 475 -------------FDEPPPNAH 483