Pairwise Alignments

Query, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 461 a.a., efflux transporter outer membrane subunit from Dickeya dianthicola ME23

 Score =  167 bits (424), Expect = 6e-46
 Identities = 132/468 (28%), Positives = 212/468 (45%), Gaps = 27/468 (5%)

Query: 8   LGLLMVLAGCTQVGPDFEKPQAPWLDGWSTPMIEQAGRSAAAPDLRQ-----WWAVFADS 62
           +  + +LAGC  +  ++++P AP       P      R++  P +       W   F D 
Sbjct: 9   ISTIFILAGCVSLASEYQRPAAP------VPQQFSLSRNSLTPAVNGYQDSGWRNFFVDP 62

Query: 63  TLDALIAEADANNTNLRVAGLRIAEARAQLAIVQTGRYPQLQQLSAQSLYLKQDQSGTPS 122
            +  LI EA  NN +LR+A L++ EARAQ  +    RYPQL   S+   Y    +S  P+
Sbjct: 63  QVTRLITEALNNNRDLRMAALKVEEARAQFNVTNADRYPQLNA-SSDITYSGGLKSDKPT 121

Query: 123 ARDSVFWQSSVGFDIGWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFA 182
            R     Q   G D+ +E+DF+G+     ES    YFAS+       +LL + V+ +YF+
Sbjct: 122 TR-----QYEAGLDLSYELDFFGKLRNMSESDRQNYFASEEARRAVHILLVSNVSQSYFS 176

Query: 183 LRTAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQL 242
            + A  +  IA+E  K   +S    E+    G  + L  +QAR Q  +T A I + +  L
Sbjct: 177 QQLAYEQRRIARETLKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKRDGDL 236

Query: 243 NALRNILCSLLGRPPGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDIRAAEQAVAAQ 302
               N L  +LG     LP  E G     +    +  ++ + +L +RPDI  AE  + A 
Sbjct: 237 AQANNALQLVLGTYRA-LPS-EKGMKDNDIKPVKLPPNLSSQILLQRPDIMEAEYQLKAA 294

Query: 303 SALVGVAEADLYPQLSLLGSIGWTFLSANHLPDTFDLAAG-----PSLIWNPFDYGRRKN 357
            A +G A A  +P +SL   +     ++  L   F  A G     P +    F+ GR K 
Sbjct: 295 DANIGAARAAFFPSISLTSGLS---ANSTELSSLFTSAGGMWNFIPKIEIPIFNAGRNKA 351

Query: 358 TVRVEDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASS 417
            +++ + R QQ +  Y+Q ++ A +   D  +      Q    +++   + Q +L  A  
Sbjct: 352 NLKLAEIRQQQSVVNYEQKIQSAFKNVADTLALRDSISQQLASQQRYLDSLQITLQRARG 411

Query: 418 QYREGFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGW 465
            Y  G   +  VLDA++ L   Q   L    +   + + L+ ALGGGW
Sbjct: 412 LYSSGAVSYIEVLDAERSLFTTQQAILDLIYSRQVNEINLFTALGGGW 459