Pairwise Alignments

Query, 385 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

Subject, 382 a.a., Hypothetical MFS-type transporter protein YcaD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 86/384 (22%), Positives = 160/384 (41%), Gaps = 25/384 (6%)

Query: 3   MRLLAGLLFAVSVVGFSLGASLPLVSLRLHEAGASTLEIGIISAIPAAGMMLSAFLVDAC 62
           M LL GLL    ++  ++     LV L L +A   T ++G++S+    G ++        
Sbjct: 9   MLLLCGLL----LLTLAIAVLNTLVPLWLAQANLPTWQVGMVSSSYFTGNLVGTLFTGYL 64

Query: 63  CRHLT-RRTIYL--LCFSLCTVSIALLESAFGSLWLLALLRLGLGLGMGIAIILGESWVN 119
            + +   R+ YL  L F+   V + ++       W     R   G+G  +  ++ ES + 
Sbjct: 65  IKRIGFNRSYYLASLIFAAGCVGLGVMVG----FWSWMSWRFIAGIGCAMIWVVVESALM 120

Query: 120 ELCPEHNRGKIMALYATSFTGFQVLGPAMLAVLGADS----PWITGVVTVCYGLALLCIV 175
                HNRG+++A Y   +     LG  +++ +  +     PW+TG++       +L ++
Sbjct: 121 CSGTSHNRGRLLAAYMMVYYMGTFLGQLLVSKVSGELLHVLPWVTGMILA----GILPLL 176

Query: 176 LTVPNDHVEHEEGEKSFGLAGFFRVAPALCMAVLFFSFFDAVVLSLLPVYATSHGFAVGV 235
            T   +         S       R A       +        +  L+P+Y    G A   
Sbjct: 177 FTRIVNQQTQARHSSSISAMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLKHQGMANAS 236

Query: 236 AALMVTVVFAGDMLFQLPLGWLADRVERTGLHLACGLVAMVIGIGLPWLLNLTWLLWPLL 295
               + V+ +  +L Q P+G LAD+  R    L   +   V+ +G   +L     + P L
Sbjct: 237 IGFWMAVLVSAGILGQWPMGRLADKFGRL---LVLRVQVFVVILGSIAMLTQA-AMAPAL 292

Query: 296 VVLGAVAGGIYTLALVLIGQRFKGQDLVTANASVGLLWGVGSLVGPLVSGAAMNVAPHGL 355
            +LGA    +Y +A+    ++ +   LV  N ++ L + VGSL+GP  S AAM +  +  
Sbjct: 293 FILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGP--SFAAMLMQNYSD 350

Query: 356 PMALALMAGLFVCFARQSYRRRGR 379
            +   ++A +   +     R  G+
Sbjct: 351 NLLFIMIASVSFIYLLMLLRNAGQ 374



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 4/188 (2%)

Query: 194 LAGFFRVAPALCMAVLFFSFFDAVVLSLLPVYATSHGFAVGVAALMVTVVFAGDMLFQLP 253
           ++ + R    L   +L  +   AV+ +L+P++            ++ +  F G+++  L 
Sbjct: 1   MSTYTRPVMLLLCGLLLLTLAIAVLNTLVPLWLAQANLPTWQVGMVSSSYFTGNLVGTLF 60

Query: 254 LGWLADRVERTGLHLACGLVAMVIGIGLPWLLNL-TWLLWPLLVVLG-AVAGGIYTLALV 311
            G+L  R+     +    L+     +GL  ++   +W+ W  +  +G A+   +   AL+
Sbjct: 61  TGYLIKRIGFNRSYYLASLIFAAGCVGLGVMVGFWSWMSWRFIAGIGCAMIWVVVESALM 120

Query: 312 LIGQRFKGQDLVTANASVGLLWG-VGSLVGPLVSGAAMNVAPHGLPMALA-LMAGLFVCF 369
             G       L+ A   V  +   +G L+   VSG  ++V P    M LA ++  LF   
Sbjct: 121 CSGTSHNRGRLLAAYMMVYYMGTFLGQLLVSKVSGELLHVLPWVTGMILAGILPLLFTRI 180

Query: 370 ARQSYRRR 377
             Q  + R
Sbjct: 181 VNQQTQAR 188