Pairwise Alignments

Query, 404 a.a., fosmidomycin efflux system from Pseudomonas putida KT2440

Subject, 397 a.a., membrane efflux protein from Variovorax sp. SCN45

 Score =  137 bits (345), Expect = 6e-37
 Identities = 100/361 (27%), Positives = 160/361 (44%), Gaps = 5/361 (1%)

Query: 21  MVMRIIGFCALAHLINDLIQSVLPAIYPMLKANYDLSFAQIGMITLTFQITASLLQPWVG 80
           M  R +G     H +NDL Q ++PA+ P +      S+  +  + L     +S++QP  G
Sbjct: 1   MNKRRLGLLTGTHAVNDLYQGLVPALLPFMVLERGYSYTAVAGLMLAATGLSSVVQPLFG 60

Query: 81  FFTDRRPTPNLLPLGTLCTLVGIVMLAFVGSFPMILLASALVGIGSSTFHPETSRIARLA 140
            + DR P   L+P G L   +G+V+     S+ +  +A  L G+G + +HP  +  AR A
Sbjct: 61  LYADRHPRGWLVPTGFLVAALGVVLAGLSQSYLLTWIAMVLCGLGIAAYHPPATVAAR-A 119

Query: 141 SGGRFGLAQSTFQVGGNTGSALGPLLAAAIVIPFGQTHVAWFGLAGLFFLGVTLMLRGWY 200
           +GG    A S F VGG  G++  P+LAA +V     +     G+  L  +GV  M+    
Sbjct: 120 AGGASQKAMSVFSVGGTIGASFAPVLAATVVGGGSLSRSYLLGVPAL-AMGVVWMVANAG 178

Query: 201 KEHLNQAKARKAVQATHG--ISRNRVIAALIVLGLLVFSKYFYMASFTSYFTFYLIEKFG 258
               + A A  A +   G  +  +    A  +L L +        +  S  +  +     
Sbjct: 179 SGAASAASAAAAARKAGGQVLKPHNDWRAFSLLVLTIIGWSIPYVTVLSMLSLRITRDLH 238

Query: 259 VSVASSQLHLFLFLGAVAAGTFFGGPIGDRIGRKAVIWFSILGVAPFTLALPYA-DLFWT 317
            +       L  F  A A GT  GG +GDRIGR   I    L   P    +  A +  W 
Sbjct: 239 GTAFQGAAALTSFTAAGAVGTLLGGWLGDRIGRMGTIRAGYLFALPSLAGVVLAPNAGWA 298

Query: 318 TVLSVVIGFILASAFSAIVVYAQELVPGSVGMIAGIFFGLMFGFGGIGAALLGYVADLRG 377
              + ++G  +   F+A V  AQ+ +P +    +GI  GL    GG+ + L G ++D RG
Sbjct: 299 LACTALLGMCMFLPFAAQVTLAQDYLPRNPATASGITLGLALSVGGLVSPLFGMLSDARG 358

Query: 378 I 378
           +
Sbjct: 359 L 359