Pairwise Alignments

Query, 404 a.a., fosmidomycin efflux system from Pseudomonas putida KT2440

Subject, 425 a.a., efflux transporter from Pseudomonas putida KT2440

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 253 LIEKFGVSVASSQLHLFLFLGAVAAGTFFGGPIGDRIGRKAVIWFSILGVAPFTLALPYA 312
           L  +F ++ A S L L +    +A G    GPI DRIGRK V+ F+++  A  TLA    
Sbjct: 68  LSREFAINAAQSSLVLSVSTAMLAFGLLITGPISDRIGRKPVMVFALVCAALSTLASAVM 127

Query: 313 DLFWTTVLS--VVIGFILASAFSAIVVY-AQELVPGSVGMIAGIFFGLMFGFGGIGAALL 369
              W  VL+   ++G  L+   +  + Y ++E+ P  +G+  G++ G     GG+   L+
Sbjct: 128 P-SWELVLATRALVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYIG-GNAIGGMSGRLI 185

Query: 370 GYVADLRGIEYVYGLCSFLPLFGLLAV 396
             V     I++V    + L + GL  V
Sbjct: 186 TGVL----IDFVSWHTAMLTIGGLALV 208



 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 76/355 (21%), Positives = 136/355 (38%), Gaps = 38/355 (10%)

Query: 38  LIQSVLPAIYPMLKANYDLSFAQIGMITLTFQITASLLQPWVGFFTDRRPTPNLLPLGTL 97
           L+  V P + P+L   + ++ AQ  ++        +      G  +DR     ++    +
Sbjct: 57  LLYCVQPMM-PLLSREFAINAAQSSLVLSVSTAMLAFGLLITGPISDRIGRKPVMVFALV 115

Query: 98  CTLVGIVMLAFVGSFPMILLASALVGIGSSTFHPET-SRIARLASGGRFGLAQSTFQVGG 156
           C  +  +  A + S+ ++L   ALVG+  S       + ++        GLA   + +GG
Sbjct: 116 CAALSTLASAVMPSWELVLATRALVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLY-IGG 174

Query: 157 NTGSALGPLLAAAIVIPFGQTHVAWFGLAGLFFLGVTLMLRGWYKEHLNQAKARKAVQAT 216
           N    +   L   ++I F   H A   + GL  +   +  +   +    +A+        
Sbjct: 175 NAIGGMSGRLITGVLIDFVSWHTAMLTIGGLALVAALVFWKVLPESRNFRAQTMNPRSLL 234

Query: 217 HGISRNRVIAALIVLGLLVFSKYFYMASFTSYFTFY----LIEKFGVSVASSQLHLFLFL 272
            G   +   A L  L L  F     M +F + F +     L E + ++ A   L   ++L
Sbjct: 235 DGFVMHFKDAGLPWLFLEAF---LLMGAFVTLFNYIGYRLLAEPYHMNQALVGLLSVVYL 291

Query: 273 GAVAAGTFFGGPIGDRIGRKAVIWFSILGVAP---FTLALPYADLFWTTVLSVVIGFI-- 327
             + +    G  + D++GR+ V W SI+ +A     TLA P   +    +L    GF   
Sbjct: 292 SGIYSSAQVGA-LADKLGRRKVFWASIVVMAVGLLMTLASPLV-MVIVGMLVFTFGFFGA 349

Query: 328 -----------------LASAFSAIVVYAQELVPGSVGMIAGIFFGLMFGFGGIG 365
                             AS+      YA   V G+ G   G+F+   +G+ GIG
Sbjct: 350 HSVASSWIGRRALKAKGQASSLYLFCYYAGSSVAGTAG---GVFWH-QWGWNGIG 400