Pairwise Alignments

Query, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 308 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 89/322 (27%), Positives = 141/322 (43%), Gaps = 48/322 (14%)

Query: 30  DPQQEALAWFSLLRQPGCDETQRQAFAAWCQVQENAHAYAELETFWQQLQPAPAR----P 85
           D  + A  W +LL      E    A   W        ++ + E  WQ+ Q    R    P
Sbjct: 4   DVARAAAQWLALLESGAATERDHAALQHW------RDSHPQHEQTWQKAQTLRQRFSDLP 57

Query: 86  RPRHV-TVRRSHLGKGLALAFLLGLAAAAYLYWPLMQRLASE-----LHTDVGERRSIRL 139
           +   + ++ R H G+   L   LG+AA     W + ++L  E     LHT  GER+ I L
Sbjct: 58  QALAMASLDRPHPGRRAVLKRALGIAALVPTAWLISRQLPIEAWRADLHTATGERKRIPL 117

Query: 140 ADGTTLNLDSASAMNVDLRGRTRQLHLVQGQVHLE------VVLDGRAMDVEVGNA---- 189
           ADG +L L++A+A++VDL    R++ LV G++ L       V +  R  ++ V  A    
Sbjct: 118 ADGGSLQLNTATAVDVDL--AQRRITLVDGELALNVPGAAAVTVRTRYGELSVSQADVCV 175

Query: 190 RIQVYGTRLQIARHAGRDELVVFSGKAMVTQGGEQRMVSA---GERVTFDDTRIDPVRKA 246
           R Q  G  + + +  G  ++   +G+    QGG+Q  + A   G  V FD  ++      
Sbjct: 176 RQQASGCLVSVLK--GSVQVRDLNGQMTTLQGGQQAPLKASGLGAWVPFDVVQL------ 227

Query: 247 DLKTADSWRNGRLKATDMPLRQVLERLAGYQ-GQRLWMMDEQVAHRRVSGDFNLDQPGQS 305
                  WR+G L A +  L   L  L  Y+ G   W  +  +   RV+G F LD   + 
Sbjct: 228 ------GWRDGVLTAQNQALGDFLRELERYRPGVLRW--EPSLETLRVTGSFRLDDTDRI 279

Query: 306 LQSLAAAQQLQLLGVLGHWLVV 327
           L  LA+   L+L     +W+ +
Sbjct: 280 LNLLASTLGLELHARTRYWVTL 301