Pairwise Alignments

Query, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 313 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 12/305 (3%)

Query: 33  QEALAWFSLLRQPGCDETQRQAFAAWCQVQ-ENAHAYAELETFWQQLQPAPARPRPRHVT 91
           ++A+ W   ++    +  Q+ A+  W     E+  A+  ++   Q+L+  P+ P      
Sbjct: 9   EQAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRGMPS-PLAHAAL 67

Query: 92  VRRSHLGKGLALAFLLGLAAAAYLYWPLMQR-----LASELHTDVGERRSIRLADGTTLN 146
              +   +  AL  LL L A +   W L Q+     L ++  + VG+RR ++LADG+ L 
Sbjct: 68  NAPTSTSRRQALKLLLILGAGSAAAWSLRQQHILPPLTADYRSPVGQRRKVQLADGSQLQ 127

Query: 147 LDSASAMNVDLRGRTRQLHLVQGQVHLEVVLDGRAMDVEVGNARIQVYGTRLQIARHAGR 206
           L++ SA++V   GR R + L++G++ L     G  + V  G   +     R+ + +    
Sbjct: 128 LNTGSAVDVHFDGRQRLIRLLEGEILLTGHAAGTPLQVLTGQGLLTSQAARMNVRQFNDH 187

Query: 207 DELVVFSGKAMV---TQGGEQRMVSAGERVTFDDTRIDPVRKADLKTADSWRNGRLKATD 263
            +L V  G+  V   T  G    V A  +V F     D  R  D  +  +W +G L A  
Sbjct: 188 TQLAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPRPTDANSG-AWADGMLVAAH 246

Query: 264 MPLRQVLERLAGYQGQRLWMMDEQVAHRRVSGDFNLDQPGQSLQSLAAAQQLQLLGVLGH 323
           M L   L  L  Y+  ++   D QVA+  +SG + LD   + L  L  +  +++     +
Sbjct: 247 MRLEDFLGELGRYRRGQV-NCDPQVANLLISGSYPLDDSERILDLLEVSLPVKVRRFTRY 305

Query: 324 WLVVR 328
           W+ V+
Sbjct: 306 WVTVQ 310