Pairwise Alignments

Query, 305 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  201 bits (512), Expect = 1e-56
 Identities = 116/292 (39%), Positives = 165/292 (56%), Gaps = 12/292 (4%)

Query: 3   LPPLNAFRYFDIAAQTESFVRAAEHLHVTHGAVSRQIRLLEESLGVELFERRNRAIFLTP 62
           LPPLNA R F+  A+  S  +AAE LHVTHGAVSRQ+++LEE LG+ LF +  R + LT 
Sbjct: 5   LPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGISLFVKDGRGLKLTD 64

Query: 63  AGRALQGTTQAIFEQLEGAVQRLQQQARDNVLVLSCEPTIAMRWLIPRLPRFHATHPDLQ 122
           AG  L+  +   FE+L      L Q + D   VL C  ++  RWLIPRL R +A  PDL+
Sbjct: 65  AGVRLRDASAEAFERLRDVCAELTQASADAPFVLGCSGSLLARWLIPRLGRLNADLPDLR 124

Query: 123 LHLVAAGGPLDFARSGVDLAIRRDDFHWDNQLYSQKICDEWIGPVCHP----------AA 172
           LHL A  G LD  R G+D  +   +  W   +   ++  E IGPV  P          A 
Sbjct: 125 LHLSAGDGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGPVMSPRFAGYAHLRDAP 184

Query: 173 CARLDGQRLLHSTTRPAAWPTWLRLSGQQARHCERSD-YEHFYLSIQAASAGLGLAIASA 231
              L G++LLH+T+RP AWP+W    G +    +    +EH Y  ++AA AGLG+AIA  
Sbjct: 185 AEALCGEKLLHTTSRPQAWPSWAAQHGIEPGALKHGQGFEHLYYLLEAAVAGLGVAIAPQ 244

Query: 232 LMVRDELDSGQLQAPFGFVRDGSAYHLLSPQPLADSGKRQRFAEWIMDECRK 283
            +V +++ +G+L AP+GF    +   L  P+  AD G+  + A+W+  E ++
Sbjct: 245 PLVAEDVRAGRLVAPWGFSETPAQLALWLPKRAAD-GRAGQLAQWLKAELQR 295