Pairwise Alignments

Query, 305 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 312 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  139 bits (351), Expect = 6e-38
 Identities = 94/289 (32%), Positives = 131/289 (45%), Gaps = 13/289 (4%)

Query: 4   PPLNAFRYFDIAAQTESFVRAAEHLHVTHGAVSRQIRLLEESLGVELFERRNRAIFLTPA 63
           PPLN  R F    +     RAAE LH+T GAVS+Q++ LE  +G  LFER  + + LTPA
Sbjct: 8   PPLNLLRAFSTVVRFGGVSRAAEALHLTQGAVSKQVQELERWIGAPLFERNRKRLALTPA 67

Query: 64  GRALQGTTQAIFEQLEGA-VQRLQQQARDNVLVLSCEPTIAMRWLIPRLPRFHATHPDLQ 122
           G   +   +A+  QLE A ++ +        L LS  PT   +WLIPRLP F   HP + 
Sbjct: 68  GERYEKAVRALLAQLEAATLELITSGDGGGALHLSTLPTFGAKWLIPRLPDFQRAHPQIT 127

Query: 123 LHLVAAGGPLDFARSGVDLAIRRDDFHWDNQLYSQKICDEWIGPVCHPAACARL------ 176
           LH V      DF R  +D AI   D HW     S  +  + +  +   AA A +      
Sbjct: 128 LHFVPFVHGYDFERPELDCAILFGDGHWPG-AQSHYLAGQDVALIAPRAAQAEVAIRTPQ 186

Query: 177 DGQR--LLHSTTRPAAWPTWLRLSGQQARH-CERSDYEHFYLSIQAASAGLGLAIASALM 233
           D  R  LL   T P +W  W    G +         ++ F   I+A   G+G+A+    +
Sbjct: 187 DVARCTLLRHVTVPQSWLQWSETHGVRGLDPLAGPQFDQFQTMIRAVMVGMGVALVPRCL 246

Query: 234 VRDELDSGQLQAPF--GFVRDGSAYHLLSPQPLADSGKRQRFAEWIMDE 280
           V+DE+ SG +  P   G  R    Y    P+          F  W++ E
Sbjct: 247 VQDEISSGLVDEPLPGGGYRGNEGYWFCYPEGRGQLATLDHFRSWLLAE 295