Pairwise Alignments

Query, 305 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  140 bits (353), Expect = 4e-38
 Identities = 97/294 (32%), Positives = 142/294 (48%), Gaps = 17/294 (5%)

Query: 2   KLPPLNAFRYFDIAAQTESFVRAAEHLHVTHGAVSRQIRLLEESLGVELFERRNRAIFLT 61
           K+P   A   F+ AA+ ESF +AA+ L +T GAV RQI  LE  L VELF R  R + LT
Sbjct: 4   KIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVRLT 63

Query: 62  PAGRALQGTTQAIFEQLEGAVQRLQQQARDNVLVLSCEPTIAMRWLIPRLPRFHATHPDL 121
            AG +      A  + +E     + +Q   NV+ L+  PT   +WL+PRL  F   HP++
Sbjct: 64  EAGLSYSRQVAAQLDAVERDTLSVMRQQGANVIELAVVPTFGTQWLLPRLKDFQQRHPEV 123

Query: 122 QLHLVAAGGPLDFARSGVDLAIRRDDFHWDNQLYSQKICDEWIGPVCHPAACARLDGQ-- 179
            ++L     P  FA +  D AI   D  W     S ++  E   PVC PA    L+GQ  
Sbjct: 124 TVNLTNRTRPFLFADTTFDAAIYFGDADWSG-TQSHQLMGENPVPVCSPAL---LNGQGM 179

Query: 180 ---------RLLHSTTRPAAWPTWLRLSGQQA-RHCERSDYEHFYLSIQAASAGLGLAIA 229
                     LL  +TRP AW  W    G    R      YE F +  QAA   +G+A+ 
Sbjct: 180 LEARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALI 239

Query: 230 SALMVRDELDSGQL-QAPFGFVRDGSAYHLLSPQPLADSGKRQRFAEWIMDECR 282
              +++ EL+ G+L  A    +    AY+L+ P+   +S   + F +W++ + +
Sbjct: 240 PPFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQAQ 293