Pairwise Alignments
Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440
Subject, 1247 a.a., diguanylate cyclase from Pseudomonas simiae WCS417
Score = 489 bits (1259), Expect = e-142
Identities = 310/863 (35%), Positives = 470/863 (54%), Gaps = 35/863 (4%)
Query: 409 LWLMARLPLQRRDYQAVILSIS-DITSRKQVELSLLERESFWSDVVRTVPDQLYVQDVPS 467
LW+ + L ++ V+ + DI+ K+ E +L E ++ V + PD L + +
Sbjct: 398 LWVRDIVSLIEHGHEPVLRGLMIDISEAKRTEEALQLSEQKFASVFQQCPDMLVIARLSD 457
Query: 468 QRMIFSNRHLGQTLGYDRTELAQMGDRFWELLLHPEDAAHYQALRRQQRDNCHDQPLHCQ 527
++ N+ +G + +G EL + L+R Q + + +
Sbjct: 458 GCLLEVNKAFEDQIGLKAEHV--VGKTATELNIWGIQGVGPDLLQRVQTTSIRN----LE 511
Query: 528 LRFRHRDGSWRCYDIREQVLTRNAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAE 587
+ F +G I + + + I+ V +D+T E Q L+ SE+++
Sbjct: 512 MPFLRSNGQAFTGLISAEPFQLDT---IEAIVVVVRDITQLKETQQQLQTSEEKFAKAFH 568
Query: 588 SISD-VIFSTDNQLKLNYVSPSVQSVLGYQADWIFANGWQSIVANPAQLTGIYSLMERVS 646
+ D ++ S L V+ + G+ + S+ + L L ER
Sbjct: 569 ASPDGLLLSRQRDGLLIEVNDGFSRITGFTSA-------TSLDQSTLDLGIWVDLNER-- 619
Query: 647 KAMGDPAQMAQLCSQLPTQLFLFDCLRADG--RKIPIELRLVLVWDDDQRFEGVLGVGRD 704
K M + Q F+ R+DG R + R + + DDD +L + RD
Sbjct: 620 KHMLELMQRDGFVRD-----FICHIRRSDGQIRLCELSSRPLPIGDDDC----MLTIARD 670
Query: 705 ISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGML 764
I++++ ++ L+ AATVFE + +LITD I N AFS ++GY+ +E L P +L
Sbjct: 671 ITERQLMQEKLQQAATVFESTAEGVLITDTRQNISAVNRAFSEITGYSEAEALGNTPRLL 730
Query: 765 TVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFF 824
+ QL +G W+GE+ +R++G+ YP+W+ I+AV + E + +V F
Sbjct: 731 ASGLHDSAFYAAMWHQLTAQGHWQGEISNRRKNGELYPSWLTISAVRNREQLITHFVAVF 790
Query: 825 TDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFK 884
DIS K ++ R+ A++D LT LPNRTLF+ RL AL + ++FLDLDRFK
Sbjct: 791 ADISSLKLAQARLDYQAHHDPLTGLPNRTLFESRLQAALNGHQETGQQGAVLFLDLDRFK 850
Query: 885 PINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHV 944
INDSLGH GD +LKD+A+RL + D DTVAR+GGDEF +LL P + A + A ++
Sbjct: 851 HINDSLGHPIGDLLLKDIAVRLKEQLRDIDTVARLGGDEFIILL---PGLQHA-SDAQYL 906
Query: 945 AENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQ 1004
A +L PF EFF++ASIG +L P+DG++++ L+KNAD AMY +K +G+N +
Sbjct: 907 ANKLLACFTPPFQAGEHEFFISASIGTSLYPEDGTDVATLVKNADAAMYRSKAKGRNRVE 966
Query: 1005 FYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGL 1064
Y ++ A A ER+ LE +LR A+E++E LYYQP+ S L GAEAL+RW HPT G
Sbjct: 967 SYTRDLTAQANERVALEHELRRAIERDELSLYYQPKLSLATHELIGAEALIRWHHPTFGD 1026
Query: 1065 VPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGT 1124
VPP FI + EE G+++ +GDWVL +A RQ+ AW +SVN++ Q L
Sbjct: 1027 VPPEHFIALAEENGMILQIGDWVLEQACRQMHAWQGHFDDFGPLSVNLAGAQLRHPGLLG 1086
Query: 1125 RIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNY 1184
RI +L + L P L+LE+TE+ +M + EAL +L LK+LG+ +A+DDFGTGYSSL+Y
Sbjct: 1087 RIKQLLHDYQLDPGRLQLEITENFIMSQAEEALDVLHQLKDLGVQLAIDDFGTGYSSLSY 1146
Query: 1185 LKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREH 1244
LK+ P+D LKID++FV GLP+ DA I RAIIA+ HS+ +IAEGVE Q FL
Sbjct: 1147 LKRLPLDFLKIDQSFVRGLPDDPHDAAIVRAIIALGHSMQFTIIAEGVENPAQQAFLAAE 1206
Query: 1245 GCDEVQGYLFGRPMPAHQFEAQF 1267
GC+++QGY+ P+P F A F
Sbjct: 1207 GCEQMQGYIVSLPLPPALFAATF 1229
Score = 60.5 bits (145), Expect = 9e-13
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 561 VGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTD-NQLKLNYVSPSVQSVLGY-QAD 618
+ ++ ++ Q LR SE YR L ES+S + + +YVSP + +LGY +A
Sbjct: 292 LSSEIARRVALEQELRSSEYHYRGLVESLSAIAWEASVADFTYSYVSPHAEELLGYPRAH 351
Query: 619 WIFANGWQSIVANPAQLTGIYSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRK 678
W+ W++I+ +PA LT + R ++A D + + + ADGR
Sbjct: 352 WLIPGFWRNII-HPADLTRAEAYCYRETRANRDHS-------------IDYRVITADGRC 397
Query: 679 IPIELRLVLVWDDDQRFEGVL-GVGRDISQQRRAEKDLRMA----ATVFEHSTSAILITD 733
+ + + L+ + E VL G+ DIS+ +R E+ L+++ A+VF+ ++I
Sbjct: 398 LWVRDIVSLI---EHGHEPVLRGLMIDISEAKRTEEALQLSEQKFASVFQQCPDMLVIAR 454
Query: 734 PA-GYIVQANEAFSRVSGYAVSEVLDQLPGMLTV 766
+ G +++ N+AF G V+ + L +
Sbjct: 455 LSDGCLLEVNKAFEDQIGLKAEHVVGKTATELNI 488
Score = 53.5 bits (127), Expect = 1e-10
Identities = 89/430 (20%), Positives = 173/430 (40%), Gaps = 56/430 (13%)
Query: 430 SDITSRKQVELSLLERESFWSDVVRTVPDQLYVQDVPSQRMIFSNRHLGQTLGYDRTELA 489
S+I R +E L E + +V ++ + V + + H + LGY R
Sbjct: 294 SEIARRVALEQELRSSEYHYRGLVESLSAIAWEASVADFTYSYVSPHAEELLGYPRAHWL 353
Query: 490 QMGDRFWELLLHPEDAAHYQAL----RRQQRDNCHDQPLHCQLRFRHRDGSWRCYDIREQ 545
G FW ++HP D +A R RD+ D +R RC +R+
Sbjct: 354 IPG--FWRNIIHPADLTRAEAYCYRETRANRDHSID--------YRVITADGRCLWVRD- 402
Query: 546 VLTRNAEGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISD-VIFSTDNQLKLNY 604
+++ G + G+ D++ ++L+ SEQ++ + + D ++ + + L
Sbjct: 403 IVSLIEHGHEPVLRGLMIDISEAKRTEEALQLSEQKFASVFQQCPDMLVIARLSDGCLLE 462
Query: 605 VSPSVQSVLGYQADWIFANGWQSIVANPAQLTGIY----SLMERVSKAMGDPAQMAQLCS 660
V+ + + +G +A+ + A + GI L++RV +M L S
Sbjct: 463 VNKAFEDQIGLKAEHVVGK-----TATELNIWGIQGVGPDLLQRVQTTSIRNLEMPFLRS 517
Query: 661 --QLPTQLFLFDCLRADGRKIPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAEKDLRMA 718
Q T L + + D E ++ V RDI+Q + ++ L+ +
Sbjct: 518 NGQAFTGLISAEPFQLD------------------TIEAIVVVVRDITQLKETQQQLQTS 559
Query: 719 ----ATVFEHSTSAILIT-DPAGYIVQANEAFSRVSGYAVSEVLDQ--LPGMLTVDEQQE 771
A F S +L++ G +++ N+ FSR++G+ + LDQ L + VD +
Sbjct: 560 EEKFAKAFHASPDGLLLSRQRDGLLIEVNDGFSRITGFTSATSLDQSTLDLGIWVDLNER 619
Query: 772 GHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTDISERK 831
H+ +L QR + + R D +++ GD + DI+ER+
Sbjct: 620 KHM----LELMQRDGFVRDFICHIRRSDGQIRLCELSSRPLPIGDDDCMLTIARDITERQ 675
Query: 832 ASEQRIHRLA 841
++++ + A
Sbjct: 676 LMQEKLQQAA 685