Pairwise Alignments

Query, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  442 bits (1138), Expect = e-128
 Identities = 244/557 (43%), Positives = 348/557 (62%), Gaps = 7/557 (1%)

Query: 705  ISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGML 764
            I+  +  E+ L + A VFE S+  ILI +    I+ AN A  R++G+ + +++ + P  L
Sbjct: 491  INHLKLMEQRLMLWAKVFEASSEGILIINGEHRILTANRALCRLTGHDLGDLVGEPPEQL 550

Query: 765  TVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFF 824
              D     H   +   L QRG+W+GEV ++RR+GD YPAW+  + V D    ++ Y+   
Sbjct: 551  MSDGSL--HFADLWPVLDQRGTWQGEVTVRRRNGDSYPAWLVASVVRDGPERISHYIFTS 608

Query: 825  TDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFK 884
             D+S+RK SE RI  LA++D LT LPNR+L  +RL  ALQQA+R+   V ++F+DLDRFK
Sbjct: 609  IDVSDRKRSEARIRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQRVGVLFIDLDRFK 668

Query: 885  PINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHV 944
             INDSLGH  GD +L+ +A R+   V   DTV+R+GGDEF ++L      +  L+    +
Sbjct: 669  NINDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVADGQEILS----L 724

Query: 945  AENILGSLVR-PFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNF 1003
             E  L SL+R P  ++  E  V+ S+GIA+ P D  ++  LM++AD AMY +K  G++  
Sbjct: 725  VERRLISLIRQPHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKASGRDTA 784

Query: 1004 QFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRG 1063
            +F+  EMN  A +RL+LES LRHA+E++E  L+YQP+       L   EALLRW+    G
Sbjct: 785  RFFTPEMNERAQQRLQLESSLRHAIERDELSLHYQPRIDAHSGELICVEALLRWQSAELG 844

Query: 1064 LVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLG 1123
             V P  FIP+ EE G +V +G WV+ +A  Q  AW +  +   +V++N+SA Q  DG L 
Sbjct: 845  QVRPAQFIPIAEESGQIVAIGAWVIEQACAQHAAWRRDGLGAIRVAINMSALQLRDGGLL 904

Query: 1124 TRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLN 1183
              +   +   G+ P  LE+ELTES LM    ++L  L +LK+LG+ +++DDFGTGYSSLN
Sbjct: 905  EVLRGAIALYGVSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGTGYSSLN 964

Query: 1184 YLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLRE 1243
            YL +FPID LKIDR+F+  +     D  IARAII + H+L L V+AEGVE  E+ + LR 
Sbjct: 965  YLNRFPIDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREEADTLRA 1024

Query: 1244 HGCDEVQGYLFGRPMPA 1260
              CDE+QGYL  RPMPA
Sbjct: 1025 ARCDELQGYLISRPMPA 1041