Pairwise Alignments

Query, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 89/306 (29%), Positives = 132/306 (43%), Gaps = 19/306 (6%)

Query: 12  QAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRH-------RLAWSYVENINQRFGGLSGQ 64
           QAA  W + LH   +    QA +  WL  D  H       ++ W   E   ++       
Sbjct: 11  QAALAWLSLLHDQPSGGD-QATFSQWLRADPAHVEAYAQAQVLWELSEVPARKLADEEAL 69

Query: 65  AEQAR-QVFDSVRRDRHSRRAVLGSLCVAGVAGVLGWGGWQRG-WVDSPRAWFATYRTGL 122
             Q      +  +R R +R +   ++    +  V    GWQ   WVD    + A Y T  
Sbjct: 70  VLQGYLNAMNPSKRSRVARWSGALAMAACLLLMVFMGVGWQPSRWVDD---FGADYVTAP 126

Query: 123 GEVRPVTLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKDPRPLSVVTRAGRV 182
           GEV+ VTLAD SQ+ L+  +A+ V F +G R ++L RG          +   V   +G  
Sbjct: 127 GEVKTVTLADQSQVTLDADSAIAVDFTQGERHIQLRRGAGFFSVTHTGQSFVVEAGSGEA 186

Query: 183 QPLGTRFSVRDQGLQTTLSVFAGAVQATCSGSGRQTTLQAGQMMVFD---AQQVGAPSTA 239
           + LGT+F VR Q     ++V +G V  T S  G+Q  L AGQ + +    A  + A  + 
Sbjct: 187 RVLGTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQQVAYAEGVADALHAVDSE 246

Query: 240 QRLREDWSRGVLVAEDMPLVQMIDILRDYRHGH-LGIDPAIGSLRAVGTFPLLDTDRALA 298
            RL   W  G L     PL  ++  L  Y  G  L ++  +G+ R  G+FP  D    L 
Sbjct: 247 SRLA--WRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFPSKDPQAVLN 304

Query: 299 MLERAL 304
            L+  L
Sbjct: 305 ALQAVL 310