Pairwise Alignments

Query, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 313 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  154 bits (388), Expect = 4e-42
 Identities = 103/313 (32%), Positives = 151/313 (48%), Gaps = 10/313 (3%)

Query: 10  VLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRFGGL-SGQAEQA 68
           V + A  W   +     +   QA W  WLN  + H+ AW +++ +NQR  G+ S  A  A
Sbjct: 7   VAEQAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRGMPSPLAHAA 66

Query: 69  RQVFDSVRRDRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVDSPRAWFATYRTGLGEVRPV 128
                S      SRR  L  L + G      W   Q+  +    A    YR+ +G+ R V
Sbjct: 67  LNAPTST-----SRRQALKLLLILGAGSAAAWSLRQQHILPPLTA---DYRSPVGQRRKV 118

Query: 129 TLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKDPRPLSVVTRAGRVQPLGTR 188
            LADGSQL LN G+A+DV FD   R +RL  GEIL+       PL V+T  G +     R
Sbjct: 119 QLADGSQLQLNTGSAVDVHFDGRQRLIRLLEGEILLTGHAAGTPLQVLTGQGLLTSQAAR 178

Query: 189 FSVRDQGLQTTLSVFAGAVQA-TCSGSGRQTTLQAGQMMVFDAQQVGAPSTAQRLREDWS 247
            +VR     T L+V  G V+    + SG    + A + + F  +    P         W+
Sbjct: 179 MNVRQFNDHTQLAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPRPTDANSGAWA 238

Query: 248 RGVLVAEDMPLVQMIDILRDYRHGHLGIDPAIGSLRAVGTFPLLDTDRALAMLERALPIR 307
            G+LVA  M L   +  L  YR G +  DP + +L   G++PL D++R L +LE +LP++
Sbjct: 239 DGMLVAAHMRLEDFLGELGRYRRGQVNCDPQVANLLISGSYPLDDSERILDLLEVSLPVK 298

Query: 308 VVRTLPWWVSIEA 320
           V R   +WV+++A
Sbjct: 299 VRRFTRYWVTVQA 311