Pairwise Alignments

Query, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 1e-36
 Identities = 106/307 (34%), Positives = 142/307 (46%), Gaps = 14/307 (4%)

Query: 9   AVLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRFGGLSGQAEQA 68
           AV + AA WFAR+  A  DA +  Q HAWL  D  HR  + ++  + Q    +  Q  +A
Sbjct: 16  AVREQAAAWFARVQDAPRDAGLHKQLHAWLASDEHHREEYEHLCRVWQAADFIPRQHLEA 75

Query: 69  RQVFDSVR---RDRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVDSPRAWFATYRTGLGEV 125
               D V+   R R  R+A+  S+ V  +   LGW GW    ++       + +T   E 
Sbjct: 76  LCRPDPVQQLPRRRFMRQALAASVAVVALG--LGWSGWHHLQLNHQ----GSLQTAFNER 129

Query: 126 RPVTLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKDP-RPLSVVTRAGRVQP 184
           R V L DGS L LNG T L V+F  G R +RL  GE++     D  RP  V T  G V  
Sbjct: 130 RQVELPDGSHLELNGNTQLQVEFSAGQRHVRLNAGEVMFSVAHDSNRPFVVDTAQGSVIV 189

Query: 185 LGTRFSVRDQGLQTTLSVFAGAVQATCSGSGRQTTLQAGQMMVFDAQ-QVGAPSTAQR-L 242
            GTRF VR     T ++V  G+V+    G      L AGQ    DAQ  V AP       
Sbjct: 190 TGTRFDVRLDPASTRVAVEQGSVRVQGKGDS-PAQLTAGQGSHIDAQGLVAAPYAVNTGA 248

Query: 243 REDWSRGVLVAEDMPLVQMIDILRDYRHGHLGIDPA-IGSLRAVGTFPLLDTDRALAMLE 301
              W +G LV ++  L +++     YR   L + P  +  LR  GTF   DTD  L  L 
Sbjct: 249 ITAWRQGKLVFDNATLAEVVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTDALLRALP 308

Query: 302 RALPIRV 308
             LP+ +
Sbjct: 309 SILPVAI 315