Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

 Score = 87.0 bits (214), Expect = 4e-22
 Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 29/272 (10%)

Query: 6   SSLLGAGLVLLATATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVDVA 65
           S++  A L LL T   A    TL R+ S          +YPPF++++ +N+L G+D+D+A
Sbjct: 6   STITTATLWLLCTVAGAAHAETL-RIASEG--------AYPPFNYVDSNNRLHGFDIDIA 56

Query: 66  KAVADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPAVI 125
            A+ +++ V     T  W+ +     + +YD  + SM  ++ R +   F   YY +P  +
Sbjct: 57  NALCERMKVNCTFVTQDWEGMIPALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSV 116

Query: 126 VVNASDERIHDAK-DLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPYD 184
            V A D  I DA+ + +G  VG+ S S+   Y  ++    G                 Y 
Sbjct: 117 AV-AHDSGISDAQTNFKGLTVGAQSYSTQAIYAEEHYAEAG------------ATVKLYP 163

Query: 185 TENVAFQDLGLGTGVRLDAIITN---LVTAQPRLQQDKRFKLAGAPLYEEPNAVAIEKGD 241
           +++ A  DL  G   RLD +I +   L+       +D    L          A+A+ +GD
Sbjct: 164 SQDEAASDLAAG---RLDGVIADKYPLLAWVAGAGKDCCTFLGDIDGTNTDAAIAVRQGD 220

Query: 242 PEWDAKVREVFAELKADGTLAKLSQKWIGADI 273
            E   ++ +   E+ ADGT   +S+++   DI
Sbjct: 221 VELRERLNKALDEIVADGTYKNISRRYFAFDI 252