Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 273 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 79.3 bits (194), Expect = 8e-20
 Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 23/270 (8%)

Query: 5   FSSLLGAGLVLLATATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDH-NQLDGYDVD 63
           F   L AGL+    A+ A   A    ++ + E+   ++ +YPP  F +   N L G+D D
Sbjct: 5   FIPTLLAGLL----ASSAVFAALPAAIKDKGEISAAIVPNYPPMDFKDPATNTLTGFDFD 60

Query: 64  VAKAVADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPA 123
           +  A+A++LGVK++ +   ++ + +G  + R DI +  MT +  R +   F ++Y++S  
Sbjct: 61  LGNALAERLGVKIKWQETGFEQMLSGLTTKRVDIVLSGMTDTAERQKSVTF-IDYFSSGP 119

Query: 124 VIVVNASDERIHDAKDLEGRKVGSISASSYES----YLNKNLVIEGKEDQKIDYPFDFVQ 179
            +   A  E + +  DL G+KVG+   +++ S    +  +N    GK    +        
Sbjct: 120 QLYTMAKREDLKELTDLCGKKVGTSRRTTWPSEIAAWSKENCEAAGKPAIVVIGTEGSAD 179

Query: 180 AAPYDTENVAFQDLGLGTGVRLDAIITNLVTAQPRLQQDK-RFKLAGAPLYEEPNAVAIE 238
           A     +N            RLDA +    T    +  DK ++K  G  + ++   + IE
Sbjct: 180 ARAQLQQN------------RLDAAMQGSETIPYLMSLDKGKYKPVGLAISKQFTGLGIE 227

Query: 239 KGDPEWDAKVREVFAELKADGTLAKLSQKW 268
           K + +    + E    +  DGT  K+ +KW
Sbjct: 228 KSNTQLVTAISEALQGMIDDGTYGKILKKW 257