Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 21/242 (8%)

Query: 35  KEMVNVLMESYPPFSFLNDHNQLDGYDVDVAKAVADKLGVKLRLETPSWDVIAAGRWSGR 94
           KE+   +   YPPF  +     L G+D+++  A+  KL VK       +D +     + +
Sbjct: 25  KEIRFGVFPEYPPFESVAADGSLQGFDIELGNAICAKLEVKCTWVHNEFDGMIPALRARK 84

Query: 95  YDICICSMTPSKARAEVFDFPVEYYASPAVIVVNASDERIHDAKDLEGRKVGSISASSYE 154
           +D  + SM  + AR ++ DF    + SP  ++   S +     + L G++VG +  S  E
Sbjct: 85  FDAIMSSMAVTPAREKIIDFSDRLFLSPTSVITRKSADFGDTPESLMGKQVGVLQGSLQE 144

Query: 155 SYLNKNLVIEGKEDQKIDYPFDFVQAAPYDTENVAFQDLGLGTGVRLDAIITNLVTAQPR 214
           +Y   +L   G             Q   Y +++  + DL  G   RLDA +T+ + AQ  
Sbjct: 145 AYARAHLAKLG------------AQIKAYQSQDQNYADLQNG---RLDATLTDKLEAQLN 189

Query: 215 -LQQDKRFKLAGAPLYEEPN-----AVAIEKGDPEWDAKVREVFAELKADGTLAKLSQKW 268
            L + +       P +++P      A+ + K D    A + +  A ++ADGT A++ +K+
Sbjct: 190 FLSKPEGSDFKTGPAFKDPTLPLDIAMGLRKNDQALRALINKGIAAVQADGTYAQIQKKY 249

Query: 269 IG 270
            G
Sbjct: 250 FG 251