Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 91.7 bits (226), Expect = 1e-23
 Identities = 77/273 (28%), Positives = 134/273 (49%), Gaps = 22/273 (8%)

Query: 3   MRFSSLLGAGLVLLATATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDV 62
           M+ + LL A L+L      A A      +++  ++V      +PPF++  +  +L G+++
Sbjct: 1   MKLARLLLASLLLTQVIFTASA-RPFPDIQASGKLVVATGGEFPPFNYF-EGKKLTGFEI 58

Query: 63  DVAKAVADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASP 122
           ++A+ V  K+G+ +  +T  +D + AG    R+DI + S   +  RA+  DF   +Y S 
Sbjct: 59  EIAEIVVKKMGLAIEWKTIGFDSLLAGLQQDRWDIVVSSHGITPERAKAVDFASPHYCSG 118

Query: 123 AVIVVNASDERIHDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAP 182
           + IV  + D  I  A DL G+ VG  + S+Y   + K  + + KE          ++  P
Sbjct: 119 SSIV--SRDPAIRGAADLTGKVVGVQTGSTYLENVRK--LTKPKE----------IKNFP 164

Query: 183 YDTENVAFQDLGLGTGVRLDAIITNLVTAQPRLQQDKRFKL-AGAPLYEEPNAVAIEKGD 241
            D +        L TG R+DA +T+   A   ++ + +  L  G PL+ E  A A+ KG+
Sbjct: 165 QDRD----VRTALATG-RVDAWVTDKFVALAAVKSNPQANLKLGDPLFVERIAAAVGKGN 219

Query: 242 PEWDAKVREVFAELKADGTLAKLSQKWIGADIS 274
               A   +  AE  ADG+ A +S ++ G D+S
Sbjct: 220 TALAAAYDKALAEALADGSYAAVSNRYFGEDVS 252