Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 84.0 bits (206), Expect = 3e-21
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 23/262 (8%)

Query: 13  LVLLATATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVDVAKAVADKL 72
           L L+ATA     GA  +     +E+      +Y PF+F N   Q+ G+D+D+  A+A + 
Sbjct: 10  LGLVATAATFALGAQAQN----RELTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQQ 65

Query: 73  GVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPAVIVVNASDE 132
           G+K+++    +  I     +G  D+ I  +T +  R + +DF   Y+A+  +I +   + 
Sbjct: 66  GLKIKIVNTPFTGIFGALNNGDVDLVISGVTINDKRKQSYDFTPPYFAARQLIAL-PKNS 124

Query: 133 RIHDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPYDTENVAFQD 192
           ++   KDL G+K+  +SAS+ +        I  +E  K        ++ P     +A   
Sbjct: 125 KVTSLKDLAGKKIAVVSASTADD-------IASREFGKTSPDIRRFESTPLIISELA--G 175

Query: 193 LGLGTGVRLDAIITNLVTAQPRLQ--QDKRFKLAGAPLYEEPNAVAIEKGDPEWDAKVRE 250
            G+   +  + +I   V   P L+   DK F        EE   + ++KGD     K+  
Sbjct: 176 GGVDAAMGDNGVIAYRVAQNPDLKTIDDKSFP-------EEGFGIVVKKGDKALLDKLTA 228

Query: 251 VFAELKADGTLAKLSQKWIGAD 272
             A ++ADG+   + +KW   D
Sbjct: 229 GLAAIRADGSYVTIYKKWFNKD 250