Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 256 a.a., amino acid ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 24/274 (8%)

Query: 4   RFSSLLGAGLVLLATATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHNQLDGYDVD 63
           R + L GA   LL T+  A +   L  +++   +      +Y P+++ +   +L G+DVD
Sbjct: 5   RLALLTGA---LLVTSALAQSQDDLSAIKAAGVIKFGTEGTYAPYTYHDASGKLVGFDVD 61

Query: 64  VAKAVADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPA 123
           V +AVA+KLGVK       WD + AG  + RYD  I  +  +K R   +DF   Y  + +
Sbjct: 62  VGRAVAEKLGVKAEFVEGRWDGLIAGVDAKRYDAVINQVGVTKERQVKYDFTQPYIDAKS 121

Query: 124 VIVVNASDERIHDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPY 183
           V++V++ +  I    DL+G K    SA S  S  +K     G E              P 
Sbjct: 122 VLIVHSDNTSIKSFNDLKGHK----SAQSLTSNYSKLATSYGAE------------IVPT 165

Query: 184 DTENVAFQDLGLGTGVRLDAIITNLVTAQ--PRLQQDKRFKLAGAPLYEEPNAVAIEKGD 241
           D  N   Q L L    R +A + + ++     + + D + K+       +P+A+ + K  
Sbjct: 166 DGFN---QSLELVLSGRAEATLNDNLSFLDFKKHKPDAKVKVVATAESGDPSAILVRKNQ 222

Query: 242 PEWDAKVREVFAELKADGTLAKLSQKWIGADISK 275
           P+    + +   ++KADGT   +S ++ G D+SK
Sbjct: 223 PQLVDALNKALDQIKADGTYKTISVRYFGQDVSK 256