Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 285 a.a., transporter substrate-binding domain-containing protein from Dickeya dadantii 3937

 Score = 80.1 bits (196), Expect = 5e-20
 Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 51/292 (17%)

Query: 14  VLLATATQAF-AGATLERVESRKEMVNVLME-SYPPFSFLNDHNQLDGYDVDVAKAVADK 71
           V + +A  AF AGA  +  +S    V +  E SY P++      +L G++ ++   +  +
Sbjct: 13  VCVVSAAAAFCAGAQAKEWKS----VTIATEGSYEPWNLTLPGGKLGGFEPELMTILCQR 68

Query: 72  LGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPAVIV----- 126
           + ++ +L   +WD + AG  +G++D+ + ++  +  R +V DF + Y ++PA  +     
Sbjct: 69  MNIQCKLVVQNWDGMIAGLQAGKFDVMMDAIVITPERKQVVDFSLPYASTPASFITVKGK 128

Query: 127 ----VNASDERIHDAKD--------------LEGRKVGSISASSYESYLNKNLVIEGKED 168
               V A    I  A D              L+G+ +G  S + Y  +++          
Sbjct: 129 LALPVEADKAMIKLANDPAQIKPAVAGLRGALQGKTIGIASGTVYTPFID---------- 178

Query: 169 QKIDYPFDFVQAAPYDTENVAFQDLGLGTGVRLDAIITNLVTAQPRLQ--QDKRFKLAG- 225
               Y  D      Y     A  DL  G   R+DA+  ++  A   L   ++    L G 
Sbjct: 179 ---SYFRDVATVREYTASADAILDLQAG---RIDAVFDDVTFANSILSKPENNNLTLGGP 232

Query: 226 ---APLYEEPNAVAIEKGDPEWDAKVREVFAELKADGTLAKLSQKWIGADIS 274
               P++ E  A+   K DPE  AK         ADGT+  LS+KW   D++
Sbjct: 233 QLTGPIWGEGEALGFRKSDPELKAKFDAAIKTALADGTVKTLSEKWFKTDVT 284