Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 278 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 26/269 (9%)

Query: 9   LGAGLVLLATATQAFAGATLERVESRKEMVNVLMESYPPFSFLNDHN-QLDGYDVDVAKA 67
           L A ++ +A A+ A A   L+ + + K +         PF+  +    ++ G+DVD+ KA
Sbjct: 8   LTAAVLGVAAASPAMADQ-LDTITANKVLRCATFADVVPFAAPDPKTREMAGFDVDLCKA 66

Query: 68  VADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPAVIVV 127
           +A +LGVK  ++  S +        GR DI + ++  +++RAE   F   YY +  +++V
Sbjct: 67  IAKELGVKAEIKPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQFSDPYYLAKEMLIV 126

Query: 128 NASDERIHDAKDLEGRKVGSISASSYESYLNKNLVIEGKEDQKIDYPFDFVQAAPYDTEN 187
              D       D EG++V S   S+ E  +  N                  ++ P   ++
Sbjct: 127 PVEDAG-KKKSDYEGQRVASTKGSTSEMSIKLN------------------KSEPLTFQD 167

Query: 188 VAFQDLGLGTGVRLDAIITNLVTAQPRLQQDKR----FKLAGAPLYEEPNAVAIEKGDPE 243
            A   L +  G +   ++ N +T    +++ K      ++   P+  +P  + + K +P 
Sbjct: 168 TASAYLAVQQG-KARGMVANTMTTTKFVKESKTKGKPMRMIEEPMLYQPIGIGMAKDNPA 226

Query: 244 WDAKVREVFAELKADGTLAKLSQKWIGAD 272
             AK+ E+  +L ADG +  +  KW+G D
Sbjct: 227 LTAKINEILRKLDADGEINTIWNKWLGPD 255