Pairwise Alignments

Query, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 257 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 27/238 (11%)

Query: 44  SYPPFSFLNDHNQLDGYDVDVAKAVADKLGVKLRLETPSWDVIAAGRWSGRYDICICSMT 103
           +YPPF+ L     L G+D+D+AKA+ +++  +    T  WD I     + ++D  I SM+
Sbjct: 36  AYPPFNNLEADGTLTGFDIDIAKALCEQMKAECTFVTNDWDGIIPALQAKKFDAIIASMS 95

Query: 104 PSKARAEVFDFPVEYYASPAVIVVNASDERIHDAKDLEGRKVGSISASSYESYLNKNLVI 163
            +  R +  DF  +YY +P  I V   D  I    DL+G+ +G+  ++++ +Y  K+   
Sbjct: 96  ITPERLQKVDFSKKYYNTPPAIAV-PKDSPIKSIDDLKGKSLGAQGSTTHSNYAEKH--- 151

Query: 164 EGKEDQKIDYPFDFVQAAPYDTENVAFQDLGLGTGVRLDAIITNLVTAQPRLQQD--KRF 221
                      F       Y T +    D+  G   R+DA+I ++V     L+ D  K  
Sbjct: 152 -----------FPDADVKMYPTADEYKLDIANG---RIDAVIDDIVVLSEWLKTDAGKCC 197

Query: 222 KLAGAPLYEEPN------AVAIEKGDPEWDAKVREVFAELKADGTLAKLSQKWIGADI 273
           K+   PL  +P        +A+ KGD     K     A ++A G   ++++K+   D+
Sbjct: 198 KIL-TPLKVDPEINGNGAGIAVRKGDTALADKFTAAIAGIRASGKYQEINKKYFDFDV 254