Pairwise Alignments

Query, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 276 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  412 bits (1060), Expect = e-120
 Identities = 213/277 (76%), Positives = 231/277 (83%), Gaps = 7/277 (2%)

Query: 1   MSTFPHSPKPVAKPAGAG----LFGFRTRLLLTWLALFGLFVAFFLSFDLKFAIILEKFP 56
           M+ FP  PKP   P  A     L GFRTRL LTW ALF LF +FFLSFDLKF+IIL+K P
Sbjct: 1   MTAFPTPPKP---PVNASRLQRLLGFRTRLYLTWAALFCLFASFFLSFDLKFSIILDKLP 57

Query: 57  NLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFR 116
           NL G  L PNGFLQGAALT+FLCLC++V S +LGF  AL RLS SAV  G+ASFY SFFR
Sbjct: 58  NLVGLHLAPNGFLQGAALTVFLCLCAIVASSILGFVTALGRLSKSAVAFGIASFYASFFR 117

Query: 117 GTPLLIQILLIYLGLPQVGLVPGAISAGIIALSLNYGAYLSEIFRAGILGVARGQREAAL 176
           GTPLLIQILLIYLGLPQ+GLVPGAI AGIIALSLNYGAYLSEIFRAGILGV  GQREAAL
Sbjct: 118 GTPLLIQILLIYLGLPQLGLVPGAIVAGIIALSLNYGAYLSEIFRAGILGVPHGQREAAL 177

Query: 177 ALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSYGRSSY 236
           ALGMR   IF H+ LPQAMR IIPP  NQFISMLKDSSLISVMGVWEVMFLAQSYGRSSY
Sbjct: 178 ALGMRDSVIFWHVTLPQAMRTIIPPATNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSY 237

Query: 237 RYLEMLTTAAVIYWVLSILLELLQARLERHFGKAYQR 273
           RY+EMLTTAA+IYWV+S+ LEL+QAR+ERH+GK Y R
Sbjct: 238 RYIEMLTTAAIIYWVMSLGLELIQARMERHYGKGYVR 274