Pairwise Alignments

Query, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 220 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  141 bits (355), Expect = 1e-38
 Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 14/226 (6%)

Query: 42  LSFDLKFAIILEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSNS 101
           +++ L FA +   FP+L          L G  L L L L S+ +  ++G   A A LS  
Sbjct: 1   MNYQLNFAAVWRDFPSL----------LAGLGLGLELALLSIAIGCVIGLMMAFAMLSKH 50

Query: 102 AVLVGVASFYTSFFRGTPLLIQILLIYLGLPQVGLVPGAISAGIIALSLNYGAYLSEIFR 161
             L   AS Y +  R TP+L+ ILLIY  LP +G+    I + II LSL  GAYL+E+FR
Sbjct: 51  RALRVFASVYVTVVRNTPILVLILLIYFALPNLGIRLDKIPSFIITLSLYAGAYLTEVFR 110

Query: 162 AGILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGV 221
           AG+L + +G REA LA+G+   +I  +I +P  +R ++P  +N FIS+ KD+SL + + V
Sbjct: 111 AGLLNIPKGLREAGLAIGLGEWRIRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAV 170

Query: 222 WEVMFLAQSYGRSSYRYLE--MLTTAAVI--YWVLSILLELLQARL 263
            E+ + A+     SYR +E  ++TTA  +   +++++LL  L+ RL
Sbjct: 171 PELTYYARKINVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRL 216