Pairwise Alignments

Query, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  135 bits (340), Expect = 8e-37
 Identities = 75/222 (33%), Positives = 128/222 (57%), Gaps = 11/222 (4%)

Query: 45  DLKFAIILEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLS-NSAV 103
           DL F+ + + +P+L          L+GA +T+ +  C++ +  +LG    + RL+     
Sbjct: 2   DLDFSPVWQGWPDL----------LRGALVTVEITACALALGCVLGLLVGIGRLNPKRRW 51

Query: 104 LVGVASFYTSFFRGTPLLIQILLIYLGLPQVGLVPGAISAGIIALSLNYGAYLSEIFRAG 163
           + G  + Y +  RGTPLL+Q+ +++ GLP  G++  A   G++ L +  GAY+SEI R  
Sbjct: 52  IYGACTAYVAAIRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGA 111

Query: 164 ILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWE 223
           I  + +GQ  AA +LGM        I+LPQA+  +IPP  N+FI+++K+S+L+S++ + +
Sbjct: 112 IQSIDKGQTMAAQSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHD 171

Query: 224 VMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLER 265
           VM   Q     SYR LE+    AV+Y+VL+  + L+    E+
Sbjct: 172 VMHEGQKIISVSYRSLEVYLAIAVVYFVLTGTMTLILRHFEQ 213