Pairwise Alignments

Query, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 262 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  134 bits (337), Expect = 2e-36
 Identities = 81/201 (40%), Positives = 115/201 (57%), Gaps = 6/201 (2%)

Query: 68  FLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLIQILLI 127
           F  G   T+ L L S +  +L G  AAL +LS       +ASFY    RGTPLL+QIL +
Sbjct: 54  FADGTRTTVRLTLVSGLAGILFGVLAALGKLSAFKPARWLASFYIWVIRGTPLLVQILFV 113

Query: 128 YLGLPQVGLVPGA----ISAGIIALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTP 183
           +L LP   L+P       ++  +AL+ N GAY +E  RAG+L V RGQ EA+ +LG+   
Sbjct: 114 FLALPV--LIPALQLDDFTSACVALAFNAGAYNAESIRAGLLAVPRGQTEASRSLGLSRG 171

Query: 184 QIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLT 243
             F  ++LPQA +V +PP  N FIS+LKDSSL   +GV E+  +      ++++ L  L 
Sbjct: 172 YTFFDVVLPQAFKVSLPPLVNNFISLLKDSSLAYAIGVVELTNVGNRMQAATFQPLPALA 231

Query: 244 TAAVIYWVLSILLELLQARLE 264
           T AVIY +L+  L  +   +E
Sbjct: 232 TIAVIYLLLTTALTQISNAVE 252