Pairwise Alignments

Query, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 256 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  144 bits (364), Expect = 1e-39
 Identities = 86/225 (38%), Positives = 130/225 (57%), Gaps = 28/225 (12%)

Query: 68  FLQGAALTLFLCLCSMVVSVLLGFAAALARLSNS--AVLVGVASF--------YTSFFRG 117
           F QGA +TL + +  +++    G   ALARL+    A    VA F        Y SFFRG
Sbjct: 23  FWQGAWMTLRMTVVCVLLGSSWGLCLALARLAQPRHAPWTWVARFFLRWPATVYVSFFRG 82

Query: 118 TPLLIQILLIYLGLPQVGLVP------------------GAISAGIIALSLNYGAYLSEI 159
           TPL +QILLI+  +  V + P                  GA+ +G++AL+LN  AY+SE+
Sbjct: 83  TPLFVQILLIHFAVMPVFIHPTSGLLIDGELARTLKQEHGALISGVVALTLNSAAYISEV 142

Query: 160 FRAGILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVM 219
           FRAGI  ++RGQ +A  +LG    Q+  +++LPQA R ++PP  N  I++LKD+SL+S +
Sbjct: 143 FRAGIQSISRGQFDAGRSLGFSPAQVMRYVVLPQAFRRMLPPLGNNAIALLKDTSLVSAI 202

Query: 220 GVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 264
           G+ E+ + A++   +  RY E     +VIYWV++++L  L  RLE
Sbjct: 203 GLAELAYAARTVAGAYARYWEPYLAISVIYWVMTLVLTTLLRRLE 247