Pairwise Alignments

Query, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 226 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  154 bits (390), Expect = 1e-42
 Identities = 85/203 (41%), Positives = 121/203 (59%)

Query: 69  LQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLIQILLIY 128
           L G  +T+ L + ++ + + L    AL  +S+   L   A FY   FRGTPLL+QI++IY
Sbjct: 17  LGGVGITIGLTIATIAIGLALALPLALGSMSSHRFLSAPARFYIWVFRGTPLLVQIVIIY 76

Query: 129 LGLPQVGLVPGAISAGIIALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCH 188
            GLPQ+GL    +++ ++ALSLN  AYLSE  R G   +A+GQ EAA AL +        
Sbjct: 77  TGLPQLGLRFDVLTSAVLALSLNEAAYLSETIRGGFSAIAKGQVEAAKALSLSRFATLRL 136

Query: 189 IILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVI 248
           + LPQ +RVIIPP  N    +LK +SL SV+ + E+M  AQ   +  +  LE+   AA  
Sbjct: 137 VTLPQVLRVIIPPLGNSVNGLLKATSLASVISMEELMRRAQVLMQEKFEVLELYCVAACF 196

Query: 249 YWVLSILLELLQARLERHFGKAY 271
           Y VL+ L + +Q RLERH+G+ Y
Sbjct: 197 YLVLTTLWDRVQVRLERHYGRGY 219